LOCUS       BC008608                1778 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens SPARC related modular calcium binding 1, mRNA (cDNA
            clone MGC:18262 IMAGE:4158532), complete cds.
ACCESSION   BC008608
VERSION     BC008608.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1778)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1778)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (25-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: David N. Louis, M.D.
            cDNA Library Preparation: Life Technologies, Inc.
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Baylor College of Medicine Human Genome
            Sequencing Center
            Center code: BCM-HGSC
            Web site: http://www.hgsc.bcm.tmc.edu/cdna/
            Contact: amg@bcm.tmc.edu
            Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
            Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
            A.N., Gibbs, R.A.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAK Plate: 12 Row: g Column: 13
            This clone was selected for full length sequencing because it
            passed the following selection criteria: Hexamer frequency ORF
            analysis, Similarity but not identity to protein.
FEATURES             Location/Qualifiers
     source          1..1778
                     /db_xref="H-InvDB:HIT000033860"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:18262 IMAGE:4158532"
                     /tissue_type="Brain, anaplastic oligodendroglioma with
                     1p/19q loss"
                     /clone_lib="NCI_CGAP_Brn67"
                     /lab_host="DH10B"
                     /note="Vector: pCMV-SPORT6"
     gene            1..1778
                     /gene="SMOC1"
                     /db_xref="GeneID:64093"
                     /db_xref="HGNC:HGNC:20318"
                     /db_xref="MIM:608488"
     CDS             251..1555
                     /gene="SMOC1"
                     /codon_start=1
                     /product="SPARC related modular calcium binding 1"
                     /protein_id="AAH08608.1"
                     /db_xref="GeneID:64093"
                     /db_xref="HGNC:HGNC:20318"
                     /db_xref="MIM:608488"
                     /translation="MLPARCARLLTPHLLLVLVQLSPARGHRTTGPRFLISDRDPQCN
                     LHCSRTQPKPICASDGRSYESMCEYQRAKCRDPTLGVVHRGRCKDAGQSKCRLERAQA
                     LEQAKKPQEAVFVPECGEDGSFTQVQCHTYTGYCWCVTPDGKPISGSSVQNKTPVCSG
                     SVTDKPLSQGNSGRKDDGSKPTPTMETQPVFDGDEITAPTLWIKHLVIKDSKLNNTNI
                     RNSEKVYSCDQERQSALEEAQQNPREGIVIPECAPGGLYKPVQCHQSTGYCWCVLVDT
                     GRPLPGTSTRYVMPSCESDARAKTTEADDPFKDRELPGCPEGKKMEFITSLLDALTTD
                     MVQAINSAAPTGGGRFSEPDPSHTLEERVVHWYFSQLDSNSSNDINKREMKPFKRYVK
                     KKAKPKKCARRFTDYCDLNKDKVISLPELKGCLGVSKEGRLV"
BASE COUNT          424 a          533 c          502 g          319 t
ORIGIN      
        1 gctgccgcct gggccccgcc gagcggagct agcgccgcgc gcagagcaca cgctcgcgct
       61 ccagctcccc tcctgcgcgg ttcatgactg tgtcccctga ccgcagcctc tgcgagcccc
      121 cgccgcagga ccacggcccg ctccccgccg ccgcgagggc cccgagcgaa ggaaggaagg
      181 gaggcgcgct gtgcgccccg cggagcccgc gaaccccgct cgctgccggc tgcccagcct
      241 ggctggcacc atgctgcccg cgcgctgcgc ccgcctgctc acgccccact tgctgctggt
      301 gttggtgcag ctgtcccctg ctcgcggcca ccgcaccaca ggccccaggt ttctaataag
      361 tgaccgtgac ccacagtgca acctccactg ctccaggact caacccaaac ccatctgtgc
      421 ctctgatggc aggtcctacg agtccatgtg tgagtaccag cgagccaagt gccgagaccc
      481 gaccctgggc gtggtgcatc gaggtagatg caaagatgct ggccagagca agtgtcgcct
      541 ggagcgggct caagccctgg agcaagccaa gaagcctcag gaagctgtgt ttgtcccaga
      601 gtgtggcgag gatggctcct ttacccaggt gcagtgccat acttacactg ggtactgctg
      661 gtgtgtcacc ccggatggga agcccatcag tggctcttct gtgcagaata aaactcctgt
      721 atgttcaggt tcagtcaccg acaagccctt gagccagggt aactcaggaa ggaaagatga
      781 cgggtctaag ccgacaccca cgatggagac ccagccggtg ttcgatggag atgaaatcac
      841 agccccaact ctatggatta aacacttggt gatcaaggac tccaaactga acaacaccaa
      901 cataagaaat tcagagaaag tctattcgtg tgaccaggag aggcagagtg ccctggaaga
      961 ggcccagcag aatccccgtg agggtattgt catccctgaa tgtgcccctg ggggactcta
     1021 taagccagtg caatgccacc agtccactgg ctactgctgg tgtgtgctgg tggacacagg
     1081 gcgcccgctg cctgggacct ccacacgcta cgtgatgccc agttgtgaga gcgacgccag
     1141 ggccaagact acagaggcgg atgacccctt caaggacagg gagctaccag gctgtccaga
     1201 agggaagaaa atggagttta tcaccagcct actggatgct ctcaccactg acatggttca
     1261 ggccattaac tcagcagcgc ccactggagg tgggaggttc tcagagccag accccagcca
     1321 caccctggag gagcgggtag tgcactggta tttcagccag ctggacagca atagcagcaa
     1381 cgacattaac aagcgggaga tgaagccctt caagcgctac gtgaagaaga aagccaagcc
     1441 caagaaatgt gcccggcgtt tcaccgacta ctgtgacctg aacaaagaca aggtcatttc
     1501 actgcctgag ctgaagggct gcctgggtgt tagcaaagaa ggacgcctcg tctaaggagc
     1561 agaaaaccca agggcaggtg gagagtccag ggaggcagga tggatcacca gacacctaac
     1621 cttcagcgtt gcccatggcc ctgccacatc ccgtgtaaca taagtggtgc ccaccatgtt
     1681 tgcactttta ataactctta cttgcgtgtt ttgtttttgg tttcatttta aaacaccaat
     1741 atctaatacc acagtgggaa aagaaaaaaa aaaaaaaa
//