LOCUS BC008498 1790 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens ATP synthase mitochondrial F1 complex assembly factor
1, mRNA (cDNA clone MGC:14830 IMAGE:4281102), complete cds.
ACCESSION BC008498
VERSION BC008498.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1790)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1790)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: f Column: 2.
FEATURES Location/Qualifiers
source 1..1790
/db_xref="H-InvDB:HIT000033832"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14830 IMAGE:4281102"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1790
/gene="ATPAF1"
/gene_synonym="ATP11"
/gene_synonym="ATP11p"
/gene_synonym="FLJ22351"
/gene_synonym="MGC88060"
/db_xref="GeneID:64756"
/db_xref="HGNC:HGNC:18803"
/db_xref="MIM:608917"
CDS 37..1023
/gene="ATPAF1"
/gene_synonym="ATP11"
/gene_synonym="ATP11p"
/gene_synonym="FLJ22351"
/gene_synonym="MGC88060"
/codon_start=1
/product="ATP synthase mitochondrial F1 complex assembly
factor 1"
/protein_id="AAH08498.1"
/db_xref="GeneID:64756"
/db_xref="HGNC:HGNC:18803"
/db_xref="MIM:608917"
/translation="MAAVVVAAAGGAGPAVLQVAGLYRGLCAVRSRALGLGLVSPAQL
RVFPVRPGSGRPEGGADGSGVGAEAELQANPFYDRYRDKIQLLRRSDPAAFESRLEKR
SEFRKQPVGHSRQGDFIKCVEQKTDALGKQSVNRGFTKDKTLSSIFNIEMVKEKTAEE
IKQIWQQYFAAKDTVYAVIPAEKFDLIWNRAQSCPTFLCALPRREGYEFFVGQWTGTE
LHFTALINIQTRGEAAASQLILYHYPELKEEKGIVLMTAEMDSTFLNVAEAQCIANQV
QLFYATDRKETYGLVETFNLRPNEFKYMSVIAELEQSGLGAELKCAQNQNKT"
BASE COUNT 508 a 405 c 454 g 423 t
ORIGIN
1 gacgcgcctg aggaggagga ggaggcgggg gcggccatgg ctgctgtggt ggtggcggct
61 gcgggtggcg cgggaccggc ggtcctgcag gtggccggtc tctaccgggg cctgtgcgcg
121 gtgcgcagcc gcgccctggg cctggggctc gtgtcacccg cgcagctgcg cgtcttccca
181 gtgcgccccg gctcgggccg gcccgagggg ggcgccgacg gcagcggggt cggggccgag
241 gccgagctcc aggccaaccc tttctacgac cgctaccgcg acaagatcca gctgctgcgc
301 aggtcagacc cagctgcttt tgagtcccgc ctggagaaac gcagtgaatt tcggaagcag
361 ccagtggggc attccaggca aggtgatttt atcaaatgtg tggaacagaa gacagatgcc
421 ttggggaaac agtctgtgaa cagaggattc actaaggaca agactctcag ttcaatcttt
481 aacattgaga tggtaaaaga aaaaactgca gaagaaataa aacagatttg gcagcaatat
541 tttgcagcaa aagatacagt ctacgcagtt attcctgcag aaaagtttga tttgatctgg
601 aaccgggctc agtcctgtcc aacatttcta tgtgctctgc caagaaggga aggttatgag
661 ttttttgtag gacaatggac aggtactgaa ctccacttca ctgcacttat aaatattcag
721 acccgagggg aagctgcagc cagccagctg attttatatc actatcctga acttaaggaa
781 gaaaagggca tagtgctgat gactgcagaa atggattcca catttctgaa tgttgctgag
841 gcacagtgca tcgccaacca agttcagctc ttctacgcta ctgatcggaa agagacctac
901 gggttagtgg agacctttaa cctcagacca aatgagttca aatatatgtc tgtcatcgct
961 gaattggagc aaagcggact tggagcagaa ctgaaatgtg cccagaacca aaataagact
1021 tagaactgta caggttggcc cttcacctag ttgactcagc cctcgatagt ctagagccca
1081 ccccctcctc aggaactcaa gagctcagca tttataatga gcagttggta atgagttgcc
1141 ctatgtgctt gtcgcaagca gtcacagaga tgagccctat tacttgatat tcaggaacaa
1201 aggtacctga acattctgat aattatctca gcatacttga ggtttccttt tttaagtgtt
1261 cgaggttata acaagagaca gccaaggacc tacaagacag ttgacttgat tttgcacagt
1321 gtaacagcgc agttgcattc tggccacttt gaccttatag ctcccaaatg atgagtttgt
1381 catctttatg aactcatgac aggataataa gcttgaagac ctgctgtagt tagatatggg
1441 ctttaatcct tcccatgcac cagtcagctg aacaaaagca taagccaaac atcctgttta
1501 aactgtagaa taaccagata ttcccatcag gttaaagact tcatctagat gatgcccccc
1561 agagatgcct ttagtgtaag tagctggctt ggggtatcag caaatttcag gtatagttag
1621 ataaacaggt acagggcctg catactatta aaccatagtt tgtggcaccc gcttttctaa
1681 ctccacctgt tagaagctat gtgtttgaag gaatgaatca gtgcagtata aataaaattc
1741 ttttgtaagg agaagaccaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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