LOCUS BC008472 1174 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
1, mRNA (cDNA clone MGC:14751 IMAGE:4282076), complete cds.
ACCESSION BC008472
VERSION BC008472.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1174)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1174)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: h Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110933.
FEATURES Location/Qualifiers
source 1..1174
/db_xref="H-InvDB:HIT000033814"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14751 IMAGE:4282076"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1174
/gene="PSMA1"
/gene_synonym="HC2"
/gene_synonym="MGC14542"
/gene_synonym="MGC14575"
/gene_synonym="MGC14751"
/gene_synonym="MGC1667"
/gene_synonym="MGC21459"
/gene_synonym="MGC22853"
/gene_synonym="MGC23915"
/gene_synonym="NU"
/gene_synonym="PROS30"
/db_xref="GeneID:5682"
/db_xref="HGNC:HGNC:9530"
/db_xref="MIM:602854"
CDS 47..838
/gene="PSMA1"
/gene_synonym="HC2"
/gene_synonym="MGC14542"
/gene_synonym="MGC14575"
/gene_synonym="MGC14751"
/gene_synonym="MGC1667"
/gene_synonym="MGC21459"
/gene_synonym="MGC22853"
/gene_synonym="MGC23915"
/gene_synonym="NU"
/gene_synonym="PROS30"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 1"
/protein_id="AAH08472.1"
/db_xref="GeneID:5682"
/db_xref="HGNC:HGNC:9530"
/db_xref="MIM:602854"
/translation="MFRNQYDNDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHA
VLVALKRAQSELAAHQKKILHVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRP
LPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCRAMS
IGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD
LEFTIYDDDDVSPFLEGLEERPQRKAQPAQPADEPAEKADEPMEH"
BASE COUNT 364 a 222 c 249 g 339 t
ORIGIN
1 gattctcagt tttgctggag gccgcaacca ggcccgcgcc gccaccatgt ttcgaaatca
61 gtatgacaat gatgtcactg tttggagccc ccagggcagg attcatcaaa ttgaatatgc
121 aatggaagct gttaaacaag gttcagccac agttggtctg aaatcaaaaa ctcatgcagt
181 tttggttgca ttgaaaaggg cgcaatcaga gcttgcagct catcagaaaa aaattctcca
241 tgttgacaac catattggta tctcaattgc ggggcttact gctgatgcta gactgttatg
301 taattttatg cgtcaggagt gtttggattc cagatttgta ttcgatagac cactgcctgt
361 gtctcgtctt gtatctctaa ttggaagcaa gacccagata ccaacacaac gatatggccg
421 gagaccatat ggtgttggtc tccttattgc tggttatgat gatatgggcc ctcacatttt
481 ccaaacctgt ccatctgcta actattttga ctgcagagcc atgtccattg gagcccgttc
541 ccaatcagct cgtacttact tggagagaca tatgtctgaa tttatggagt gtaatttaaa
601 tgaactagtt aaacatggtc tgcgtgcctt aagagagacg cttcctgcag aacaggacct
661 gactacaaag aatgtttcca ttggaattgt tggtaaagac ttggagttta caatctatga
721 tgatgatgat gtgtctccat tcctggaagg tcttgaagaa agaccacaga gaaaggcaca
781 gcctgctcaa cctgctgatg aacctgcaga aaaggctgat gaaccaatgg aacattaagt
841 gataagccag tctatatatg tattatcaaa tatgtaagaa tacaggcacc acatactgat
901 gacaataatc tatactttga accaaaagtt gcagagtggt ggaatgctat gttttaggaa
961 tcagtccaga tgtgagtttt ttccaagcaa cctcactgaa acctatataa tggaatacat
1021 ttttctttga aagggtctgt ataatcattt tctagaaagt atgggtatct atactaatgt
1081 ttttatatga agaacatagg tgtctttgtg gttttaaaga caactgtgaa ataaaattgt
1141 ttcaccgcca aaaaaaaaaa aaaaaaaaaa aaaa
//