LOCUS BC008470 1001 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2B (RAD6 homolog), mRNA
(cDNA clone MGC:14743 IMAGE:4281004), complete cds.
ACCESSION BC008470
VERSION BC008470.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1001)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1001)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: m Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 32967281.
FEATURES Location/Qualifiers
source 1..1001
/db_xref="H-InvDB:HIT000033813"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14743 IMAGE:4281004"
/tissue_type="Brain, primitive neuroectodermal"
/clone_lib="NIH_MGC_56"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1001
/gene="UBE2B"
/gene_synonym="E2-17kDa"
/gene_synonym="HHR6B"
/gene_synonym="HR6B"
/gene_synonym="RAD6B"
/gene_synonym="UBC2"
/db_xref="GeneID:7320"
/db_xref="HGNC:HGNC:12473"
/db_xref="MIM:179095"
CDS 88..546
/gene="UBE2B"
/gene_synonym="E2-17kDa"
/gene_synonym="HHR6B"
/gene_synonym="HR6B"
/gene_synonym="RAD6B"
/gene_synonym="UBC2"
/codon_start=1
/product="ubiquitin-conjugating enzyme E2B (RAD6 homolog)"
/protein_id="AAH08470.1"
/db_xref="GeneID:7320"
/db_xref="HGNC:HGNC:12473"
/db_xref="MIM:179095"
/translation="MSTPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPE
GTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDILQNRWSPTYDV
SSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQSWNDS"
BASE COUNT 322 a 167 c 202 g 310 t
ORIGIN
1 acagtgattc ggccgccgcg ccggggggtg ggggggctgc gcgggacttt tttttttttc
61 agactgaccg cggggcagct gcggagcatg tcgaccccgg cccggaggag gctcatgcgg
121 gatttcaagc ggttacaaga ggacccacct gtgggtgtca gtggcgcacc atctgaaaac
181 aacatcatgc agtggaatgc agttatattt ggaccagaag ggacaccttt tgaagatggt
241 acttttaaac tagtaataga attttctgaa gaatatccaa ataaaccacc aactgttagg
301 tttttatcca aaatgtttca tccaaatgtg tatgctgatg gtagcatatg tttagatatc
361 cttcagaatc gatggagtcc aacatatgat gtatcttcta tcttaacatc aattcagtct
421 ctgctggatg aaccgaatcc taacagtcca gccaatagcc aggcagcaca gctttatcag
481 gaaaacaaac gagaatatga gaaaagagtt tcggccattg ttgaacaaag ctggaatgat
541 tcataataga caactggtct gttaatcttt ttcatcattg ttgtgtataa tttacctctc
601 attagaaagg ctaacaaatt ttaagtgcca caggttttaa ggattctgca gaaaaaaaag
661 aaaaaagtcc ttcagtttag aacctacaaa agcttgtgta tcttgattaa tgtacttttt
721 attgcatggt gtgaactaag ttattgctgc ataaatttgt aatatatcct gtttgtattt
781 ttttccaagt gtataatgtt ggtgtggagt tttcatgaca gaatatacac attttgtaaa
841 tctgtacttt tttcaaatat tgaatgcctt atttttgaat tctttagatt tttaaattgg
901 agaaaagcac ttaaagtttt ttatatatga atattacatg taaagctgtt aaaatacata
961 acttcagtgc caaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
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