LOCUS BC008405 2054 bp mRNA linear HUM 24-FEB-2004
DEFINITION Homo sapiens pregnancy specific beta-1-glycoprotein 4, mRNA (cDNA
clone MGC:14528 IMAGE:4043484), complete cds.
ACCESSION BC008405
VERSION BC008405.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2054)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2054)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 21 Row: m Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21361391.
FEATURES Location/Qualifiers
source 1..2054
/db_xref="H-InvDB:HIT000033767"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14528 IMAGE:4043484"
/tissue_type="Placenta"
/clone_lib="NIH_MGC_79"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2054
/gene="PSG4"
/gene_synonym="PSG9"
/db_xref="GeneID:5672"
/db_xref="MIM:176393"
CDS 98..1357
/gene="PSG4"
/gene_synonym="PSG9"
/codon_start=1
/product="PSG4 protein"
/protein_id="AAH08405.1"
/db_xref="GeneID:5672"
/db_xref="MIM:176393"
/translation="MGTLSAPPCTQRIKWKGLLLTASLLNFWNLPTTAQVTIEAEPTK
VSEGKDVLLLVHNLPQNLTGYIWYKGQMRDLYHYITSYVVDGEIIIYGPAYGGRETAY
SNASLLIQNVTREDAGSYTLHIIKGDDGTRGVTGRFTFTLHLETPKPSISSSNLNPRE
TMEAVSLTCDPETPDASYLWWMNGQSLPMTHSLKLSETNRTLFLLGVTKYTAGPYECE
IRNPVSASRSDPVTLNLLPKLSKPYITINNLNPRENKDVLTFTCEPKSENYTYIWWLN
GQSLPVSPRVKRPIENRILILPNVTRNETGPYQCEIRDRYGGIRSDPVTLNVLYGPDL
PSIYPSFTYYRSGENLYLSCFAESNPRAQYSWTINGKFQLSGQKLSIPQITTKHSGLY
ACSVRNSATGKESSKSITVKVSDWILP"
misc_feature 542..784
/gene="PSG4"
/gene_synonym="PSG9"
/note="IGcam; Region: Immunoglobulin domain cell adhesion
molecule (cam) subfamily"
/db_xref="CDD:cd00931"
misc_feature 863..1084
/gene="PSG4"
/gene_synonym="PSG9"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 1130..1297
/gene="PSG4"
/gene_synonym="PSG9"
/note="IGc2; Region: Immunoglobulin C-2 Type"
/db_xref="CDD:smart00408"
BASE COUNT 630 a 535 c 413 g 476 t
ORIGIN
1 agaaagagga aggacagcac agctgacagc cgtgctcaga gagtttctgg atcctaggct
61 tatctccaca gaggagaaca cacaagcagc agagaccatg ggaaccctct cagcccctcc
121 ctgcacacag cgcatcaaat ggaaggggct cctgctcaca gcatcacttt taaacttctg
181 gaacctgccc accactgccc aagtcacgat tgaagccgag ccaaccaaag tttccgaggg
241 gaaggatgtt cttctacttg tccacaattt gccccagaat cttaccggct acatctggta
301 caaagggcaa atgagggacc tctaccatta cattacatca tatgtagtag acggtgaaat
361 aattatatat gggcctgcat atggtggacg agaaacagca tattccaatg catccctgct
421 gatccagaat gtcacccggg aggacgcagg atcctacacc ttacacatca taaagggaga
481 tgatgggact agaggagtaa ctggacgttt caccttcacc ttacacctgg agactcctaa
541 gccctccatc tccagcagca acttaaatcc cagggagacc atggaggctg tgagcttaac
601 ctgtgaccct gagactccag acgcaagcta cctgtggtgg atgaatggtc agagcctccc
661 tatgactcac agcttgaagc tgtccgaaac caacaggacc ctctttctat tgggtgtcac
721 aaagtatact gcaggaccct atgaatgtga aatacggaac ccagtgagtg ccagccgcag
781 tgacccagtc accctgaatc tcctcccaaa gctgtccaag ccctacatca caatcaacaa
841 cttaaacccc agagagaata aggatgtctt aaccttcacc tgtgaaccta agagtgagaa
901 ctacacctac atttggtggc taaatggtca gagcctccct gtcagtccca gggtaaagcg
961 acccattgaa aacaggatcc tcattctacc caatgtcacg agaaatgaaa caggacctta
1021 tcaatgtgaa atacgggacc gatatggtgg catccgcagt gacccagtca ccctgaatgt
1081 cctctatggt ccagacctcc ccagcattta cccttcattc acctattacc gttcaggaga
1141 aaacctctac ttgtcctgct tcgccgagtc taacccacgg gcacaatatt cttggacaat
1201 taatgggaag tttcagctat caggacaaaa gctctctatc ccccaaataa ctacaaagca
1261 tagtgggctc tatgcttgct ctgttcgtaa ctcagccact ggcaaggaaa gctccaaatc
1321 catcacagtc aaagtctctg actggatatt accctgaatt ctactagttc ctccaattcc
1381 attttctccc atggaatcac gaagagcaag acccactctg ttccagaagc cctataagct
1441 ggaggtggac aactcgatgt aaatttcatg ggaaaaccct tgtacctgac atgtgagcca
1501 ctcagaactc accaaaatgt tcgacaccat aacaacagct actcaaactg taaaccagga
1561 taagaagttg atgacttcac actgtggaca gtttttccaa agatgtcaga acaagactcc
1621 ccatcatgat aaggctccca cccctcttaa ctgtccttgc tcatgcctgc ctctttcact
1681 tggcaggata atgcagtcat tagaatttca catgtagtag cttctgaggg taacaacaga
1741 gtgtcagata tgtcatctca acctcaaact tttacgtaac atctcagggg aaatgtggct
1801 ctctccatct tgcatacagg gctcccaata gaaatgaaca cagagatatt gcctgtgtgt
1861 ttgcagagaa gatggtttct ataaagagta ggaaagctga aattatagta gagtctcctt
1921 taaatgcaca ttgtgtggat ggctctcacc atttcctaag agatacagtg taaaacgtga
1981 cagtaatact gattctagca gaataaaaca tgtaccacat ttgctaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaa
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