LOCUS BC008403 1202 bp mRNA linear HUM 28-SEP-2004 DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 1, mRNA (cDNA clone MGC:14522 IMAGE:4272571), complete cds. ACCESSION BC008403 VERSION BC008403.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1202) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1202) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: CLONTECH cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 21 Row: i Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 26665892. FEATURES Location/Qualifiers source 1..1202 /db_xref="H-InvDB:HIT000033765_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14522 IMAGE:4272571" /tissue_type="Prostate" /clone_lib="NIH_MGC_83" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1202 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /db_xref="GeneID:3123" /db_xref="MIM:142857" CDS 64..864 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /codon_start=1 /product="HLA-DRB1 protein" /protein_id="AAH08403.1" /db_xref="GeneID:3123" /db_xref="MIM:142857" /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSEC HFFNGTERVRFLDRYFYNQEEYVRFDSDVGEYRAVTELGRPSAEYWNSQKDILEDKRA AVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRW FRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPRGFLS" BASE COUNT 277 a 316 c 328 g 281 t ORIGIN 1 atagttctcc ctgagtgaga cttgcctgct gctctggccc ctggtcctgt cctgttctcc 61 agcatggtgt gtctgaggct ccctggaggc tcctgcatgg cagttctgac agtgacactg 121 atggtgctga gctccccact ggctttggct ggggacacca gaccacgttt cttggagtac 181 tctacgtctg agtgtcattt cttcaatggg acggagcggg tgcggttcct ggacagatac 241 ttctataacc aagaggagta cgtgcgcttc gacagcgacg tgggggagta ccgggcggtg 301 acggagctgg ggcggcctag cgccgagtac tggaacagcc agaaggacat cctggaagac 361 aagcgggccg cggtggacac ctactgcaga cacaactacg gggttggtga gagcttcacg 421 gtgcagcggc gagtccatcc taaggtgact gtgtatcctt caaagaccca gcccctgcag 481 caccacaacc tcctggtctg ttctgtgagt ggtttctatc caggcagcat tgaagtcagg 541 tggttccgga atggccagga agagaagact ggggtggtgt ccacaggcct gatccacaat 601 ggagactgga ccttccagac cctggtgatg ctggaaacag ttcctcggag tggagaggtt 661 tacacctgcc aagtggagca cccaagcgtg acaagccctc tcacagtgga atggagagca 721 cggtctgaat ctgcacagag caagatgctg agtggagtcg ggggctttgt gctgggcctg 781 ctcttccttg gggccgggct gttcatctac ttcaggaatc agaaaggaca ctctggactt 841 cagccaagag gattcctgag ctgaagtgca gatgacacat tcaaagaaga actttctgcc 901 ccagctttgc aggatgaaaa gctttccctc ctggctgtta ttcttccaca agagagggct 961 ttctcaggac ctggttgcta ctggttcagc aactgcagaa aatgtcctcc cttgtggctt 1021 cctcagctcc tgttcttggc ctgaagccca cagctttgat ggcagcgcct catcttcaac 1081 ttttgtgctc ccctttgcct aaaccctatt gcctcctgtg catctgtact caccctgtac 1141 cacaaacaca ttacattatt aaatgtttcc caaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 aa //