LOCUS BC008376 1502 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 5, mRNA (cDNA clone MGC:12304 IMAGE:3826939), complete cds. ACCESSION BC008376 VERSION BC008376.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1502) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1502) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: CLONTECH Laboratories, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 16 Row: k Column: 17 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 41872613. FEATURES Location/Qualifiers source 1..1502 /db_xref="H-InvDB:HIT000033752" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:12304 IMAGE:3826939" /tissue_type="Kidney, hypernephroma" /clone_lib="NIH_MGC_58" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..1502 /gene="CXCL5" /gene_synonym="ENA-78" /db_xref="GeneID:6374" /db_xref="HGNC:HGNC:10642" /db_xref="MIM:600324" CDS 100..444 /gene="CXCL5" /gene_synonym="ENA-78" /codon_start=1 /product="chemokine (C-X-C motif) ligand 5" /protein_id="AAH08376.1" /db_xref="GeneID:6374" /db_xref="HGNC:HGNC:10642" /db_xref="MIM:600324" /translation="MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVL RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKV IQKILDGGNKEN" BASE COUNT 431 a 281 c 303 g 487 t ORIGIN 1 gccacagtgc tccggatcct ccaatcttcg ctcctccaat ctccgctcct ccacccagtt 61 caggaacccg cgaccgctcg cagcgctctc ttgaccacta tgagcctcct gtccagccgc 121 gcggcccgtg tccccggtcc ttcgagctcc ttgtgcgcgc tgttggtgct gctgctgctg 181 ctgacgcagc cagggcccat cgccagcgct ggtcctgccg ctgctgtgtt gagagagctg 241 cgttgcgttt gtttacagac cacgcaagga gttcatccca aaatgatcag taatctgcaa 301 gtgttcgcca taggcccaca gtgctccaag gtggaagtgg tagcctccct gaagaacggg 361 aaggaaattt gtcttgatcc agaagcccct tttctaaaga aagtcatcca gaaaattttg 421 gacggtggaa acaaggaaaa ctgattaaga gaaatgagca cgcatggaaa agtttcccag 481 tcttcagcag agaagttttc tggaggtctc tgaacccagg gaagacaaga aggaaagatt 541 ttgttgttgt ttgtttattt gtttttccag tagttagctt tcttcctgga ttcctcactt 601 tgaagagtgt gaggaaaacc tatgtttgcc gcttaagctt tcagctcagc taatgaagtg 661 tttagcatag tacctctgct atttgctgtt attttatctg ctatgctatt gaagttttgg 721 caattgacta tagtgtgagc caggaatcac tggctgttaa tctttcaaag tgtcttgaat 781 tgtaggtgac tattatattt ccaagaaata ttccttaaga tattaactga gaaggctgtg 841 gatttaatgt ggaaatgatg tttcataaga attctgttga tggaaataca ctgttatctt 901 cacttttata agaaatagga aatattttaa tgtttcttgg ggaatatgtt agagaatttc 961 cttactcttg attgtgggat actatttaat tatttcactt tagaaagctg agtgtttcac 1021 accttatcta tgtagaatat atttccttat tcagaatttc taaaagttta agttctatga 1081 gggctaatat cttatcttcc tataatttta gacattcttt atctttttag tatggcaaac 1141 tgccatcatt tacttttaaa ctttgatttt atatgctatt tattaagtat tttattagga 1201 gtaccataat tctggtagct aaatatatat tttagataga tgaagaagct agaaaacagg 1261 caaattcctg actgctagtt tatatagaaa tgtattcttt tagtttttaa agtaaaggca 1321 aacttaacaa tgacttgtac tctgaaagtt ttggaaacgt attcaaacaa tttgaatata 1381 aatttatcat ttagttataa aaatatatag cgacatcctc gaggccctag catttctcct 1441 tggatagggg accagagaga gcttggaatg tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1501 aa //