LOCUS BC008376 1502 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens chemokine (C-X-C motif) ligand 5, mRNA (cDNA clone
MGC:12304 IMAGE:3826939), complete cds.
ACCESSION BC008376
VERSION BC008376.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1502)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1502)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: k Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 41872613.
FEATURES Location/Qualifiers
source 1..1502
/db_xref="H-InvDB:HIT000033752"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12304 IMAGE:3826939"
/tissue_type="Kidney, hypernephroma"
/clone_lib="NIH_MGC_58"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..1502
/gene="CXCL5"
/gene_synonym="ENA-78"
/db_xref="GeneID:6374"
/db_xref="HGNC:HGNC:10642"
/db_xref="MIM:600324"
CDS 100..444
/gene="CXCL5"
/gene_synonym="ENA-78"
/codon_start=1
/product="chemokine (C-X-C motif) ligand 5"
/protein_id="AAH08376.1"
/db_xref="GeneID:6374"
/db_xref="HGNC:HGNC:10642"
/db_xref="MIM:600324"
/translation="MSLLSSRAARVPGPSSSLCALLVLLLLLTQPGPIASAGPAAAVL
RELRCVCLQTTQGVHPKMISNLQVFAIGPQCSKVEVVASLKNGKEICLDPEAPFLKKV
IQKILDGGNKEN"
BASE COUNT 431 a 281 c 303 g 487 t
ORIGIN
1 gccacagtgc tccggatcct ccaatcttcg ctcctccaat ctccgctcct ccacccagtt
61 caggaacccg cgaccgctcg cagcgctctc ttgaccacta tgagcctcct gtccagccgc
121 gcggcccgtg tccccggtcc ttcgagctcc ttgtgcgcgc tgttggtgct gctgctgctg
181 ctgacgcagc cagggcccat cgccagcgct ggtcctgccg ctgctgtgtt gagagagctg
241 cgttgcgttt gtttacagac cacgcaagga gttcatccca aaatgatcag taatctgcaa
301 gtgttcgcca taggcccaca gtgctccaag gtggaagtgg tagcctccct gaagaacggg
361 aaggaaattt gtcttgatcc agaagcccct tttctaaaga aagtcatcca gaaaattttg
421 gacggtggaa acaaggaaaa ctgattaaga gaaatgagca cgcatggaaa agtttcccag
481 tcttcagcag agaagttttc tggaggtctc tgaacccagg gaagacaaga aggaaagatt
541 ttgttgttgt ttgtttattt gtttttccag tagttagctt tcttcctgga ttcctcactt
601 tgaagagtgt gaggaaaacc tatgtttgcc gcttaagctt tcagctcagc taatgaagtg
661 tttagcatag tacctctgct atttgctgtt attttatctg ctatgctatt gaagttttgg
721 caattgacta tagtgtgagc caggaatcac tggctgttaa tctttcaaag tgtcttgaat
781 tgtaggtgac tattatattt ccaagaaata ttccttaaga tattaactga gaaggctgtg
841 gatttaatgt ggaaatgatg tttcataaga attctgttga tggaaataca ctgttatctt
901 cacttttata agaaatagga aatattttaa tgtttcttgg ggaatatgtt agagaatttc
961 cttactcttg attgtgggat actatttaat tatttcactt tagaaagctg agtgtttcac
1021 accttatcta tgtagaatat atttccttat tcagaatttc taaaagttta agttctatga
1081 gggctaatat cttatcttcc tataatttta gacattcttt atctttttag tatggcaaac
1141 tgccatcatt tacttttaaa ctttgatttt atatgctatt tattaagtat tttattagga
1201 gtaccataat tctggtagct aaatatatat tttagataga tgaagaagct agaaaacagg
1261 caaattcctg actgctagtt tatatagaaa tgtattcttt tagtttttaa agtaaaggca
1321 aacttaacaa tgacttgtac tctgaaagtt ttggaaacgt attcaaacaa tttgaatata
1381 aatttatcat ttagttataa aaatatatag cgacatcctc gaggccctag catttctcct
1441 tggatagggg accagagaga gcttggaatg tcaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1501 aa
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