LOCUS BC008369 2866 bp mRNA linear HUM 04-OCT-2003
DEFINITION Homo sapiens staufen, RNA binding protein, homolog 2 (Drosophila),
mRNA (cDNA clone MGC:12191 IMAGE:3682739), complete cds.
ACCESSION BC008369
VERSION BC008369.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2866)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2866)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 16 Row: m Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7657624.
FEATURES Location/Qualifiers
source 1..2866
/db_xref="H-InvDB:HIT000033746"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12191 IMAGE:3682739"
/tissue_type="Bladder, carcinoma"
/clone_lib="NIH_MGC_53"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..2866
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/db_xref="GeneID:27067"
/db_xref="MIM:605920"
CDS 220..1836
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/codon_start=1
/product="STAU2 protein"
/protein_id="AAH08369.1"
/db_xref="GeneID:27067"
/db_xref="MIM:605920"
/translation="MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLP
KPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMY
NQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNG
ESGKDMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSA
EGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNP
ISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAA
EAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQEME
ASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGL
KGSSPTPPCSPVQPSKQLEYLARIQGFQAALSALKQFSEQGLDPIDGAMNIEKGSLEK
QAKHLREKADNNQAPPGSIAQDCKKSNSAV"
misc_feature 409..663
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/note="DSRM; Region: Double-stranded RNA binding motif"
/db_xref="CDD:smart00358"
misc_feature 748..933
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/note="DSRM; Region: Double-stranded RNA binding motif"
/db_xref="CDD:smart00358"
misc_feature 982..1245
/gene="STAU2"
/gene_synonym="39K2"
/gene_synonym="39K3"
/note="Rnc; Region: dsRNA-specific ribonuclease
[Transcription]"
/db_xref="CDD:COG0571"
BASE COUNT 953 a 577 c 617 g 719 t
ORIGIN
1 agttctctgt agtgtttgcc aatgttggag ccgtctgcaa agtgtccccg gcaagaagag
61 gctgcctacc acaaggactt tagcttactt tttaaagatt gaagaaaaaa aagaagacag
121 aaaaagaaga actcaaagat acacaaagta atttgaacca aggctcagaa gtttttggag
181 ccgtgaggga tacagcagtt tggtcaatat tgtcttaaca tgcttcaaat aaatcagatg
241 ttctcagtgc agctgagtct tggtgagcag acatgggaat ccgaaggcag cagtataaag
301 aaggctcagc aggctgttgc caataaagct ttgactgaat ctacgcttcc caaaccagtt
361 cagaagccac ccaaaagtaa tgttaacaat aacccaggca gtataactcc aactgtggaa
421 ctgaatgggc ttgctatgaa aaggggagag cctgccatct acaggccatt agatccaaag
481 ccattcccaa attatagagc taattacaac tttcggggca tgtacaatca gaggtatcat
541 tgcccagtgc ctaagatctt ttatgttcag ctcactgtag gaaataatga attttttggg
601 gaaggaaaga ctcgacaagc tgctagacac aatgctgcaa tgaaagccct ccaagcactg
661 cagaatgaac ctattccaga aagatctcct cagaatggtg aatcaggaaa ggatatggat
721 gatgacaaag atgcaaataa gtctgagatc agcttagtgt ttgaaattgc tctgaagcga
781 aatatgcctg tcagttttga ggttattaaa gaaagtggac caccacatat gaaaagcttt
841 gttactcgag tgtcagtagg agagttctct gcagaaggag aaggaaatag caaaaaactc
901 tccaagaagc gcgctgcgac caccgtctta caggagctta aaaaacttcc acctcttcct
961 gtggtggaaa agccaaaact attttttaaa aaacgcccta aaacaatagt aaaggccgga
1021 ccagaatatg gccaagggat gaaccctatt agccgcctgg cgcaaattca acaggccaaa
1081 aaggaaaagg agccggatta tgttttgctt tcagaaagag gaatgcctcg acgtcgagaa
1141 tttgtgatgc aggtgaaggt aggcaatgaa gttgctacag gaacaggacc taataaaaag
1201 atagccaaaa aaaatgctgc agaagcaatg ctgttacaac ttggttataa agcatccact
1261 aatcttcagg atcaacttga gaagacaggg gaaaacaaag gatggagtgg tccaaagcct
1321 gggtttcctg aaccaacaaa taatactcca aaaggaattc ttcatttgtc tcctgatgtt
1381 tatcaagaga tggaagccag ccgccacaaa gtaatctctg gcactactct aggctatttg
1441 tcacccaaag atatgaacca accttcaagc tctttcttca gtatatctcc cacatcgaat
1501 agttcagcta caattgccag ggaactcctt atgaatggaa catcttctac agctgaagcc
1561 ataggtttaa aaggaagttc tcctactccc ccttgttctc cagtacaacc ttcaaaacaa
1621 ctggaatatt tagcaaggat tcaaggcttt caggcagcct taagtgcctt gaaacaattt
1681 tctgaacaag gactggatcc aatcgatgga gcaatgaata tcgaaaaagg ttctcttgaa
1741 aaacaagcca agcatctgag agagaaagcg gacaataacc aggcaccccc gggctccatc
1801 gctcaggact gcaagaaatc aaactcggcc gtctagcagc tcccagaacc cgcggctgcc
1861 accgcatcct tataaacctg tcagcacgca tgagggtgtc tgtgttcagg gaaatgaatg
1921 actaatacca ttatttgagt cttatgtgaa gacaacacta ttctaacacg agagataata
1981 tacatggtac tgtttattca actggggaaa aataaaactt tgagcatttc ccttggaact
2041 cgagatcaga tcataactca tttgcctaga ggcagcagaa atctgatcct gctactggag
2101 cttaaaataa caagtaaaga aaagtgttag aaacaaagct aaaattttaa catgattaat
2161 aatagagaag ttgggtttgg ttctgttgtt atgattgttt tgtcgtggtg cttgtgttca
2221 gttatattct ctctctctct catttcaaat actgcttgac aattcgaaaa tgaaccaatg
2281 atgtgctgtg gaatgtgatg gttgtcttca tatagagtca catggtttct ctttttatgc
2341 agatatttat aatcttcatc ctatatcagt aggaataact ataaggtgca ctacaaaaag
2401 atgtatgcaa acaaacatgt tttaaatcag gtcagatatc tgatgaaaaa tacgaactaa
2461 tgttaagagc aagtagtttc aacatactcc aggaactgag aaacaaaaca aagcaattgt
2521 gggttttgag ctccatatac tcttagcaag taagggggcg tcttgcccct atatatcatc
2581 ttcccggatt ccactccctg ttgtgggaat cgcgcccacc cccatccgtg tgttgtagcc
2641 actcacggtt tgcatcaaga gtgttttttg taactgcctc tggacttggg acagtgagta
2701 ggatcaaaaa taaataatgt acatgacggg gaagggaaaa acctgttgga gttgcttcca
2761 gccagccacg ctccgggcca gcatgttgga atccagcgtg gagcagatgc agtaaaaatg
2821 tggttggttt ctgtgcaaaa aaaaaaaaaa aaaaaaaaaa aaaaaa
//