LOCUS BC008306 810 bp mRNA linear HUM 20-SEP-2004
DEFINITION Homo sapiens chromosome 1 open reading frame 43, mRNA (cDNA clone
MGC:15205 IMAGE:3502049), complete cds.
ACCESSION BC008306
VERSION BC008306.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 810)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 810)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: b Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 14149687.
FEATURES Location/Qualifiers
source 1..810
/db_xref="H-InvDB:HIT000033713"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15205 IMAGE:3502049"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..810
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/db_xref="GeneID:25912"
CDS 127..696
/gene="C1orf43"
/gene_synonym="DKFZp586G1722"
/gene_synonym="HSPC012"
/gene_synonym="NICE-3"
/codon_start=1
/product="C1orf43 protein"
/protein_id="AAH08306.1"
/db_xref="GeneID:25912"
/translation="MASGSNWLSGVNVVLVMAYGSLVFVLLFIFVKRQIMRFAMKSRR
GPHVPVGHNAPKDLKEEIDIRLSRVQDIKYEPQLLADDDARLLQLETQGNQSCYNYLY
RMKALDAIRTSEIPFHSEGRHPRSLMGKNFRSYLLDLRNTSTPFKGVRKALIDTLLDG
YETARYGTGVFGQNEYLRYQEALSELATA"
BASE COUNT 210 a 192 c 226 g 182 t
ORIGIN
1 cttcccccgt aaggaaatgg ccggggagct ccaggggacc caggcgccgt cgcttcggcg
61 gagcctgggc tgaccagcca ggacagcggg gtaaacccga acaattctgc gcgaggtagg
121 gaggccatgg cgtccggcag taactggctc tccggggtga atgtcgtgct ggtgatggcc
181 tacgggagcc tggtgtttgt actgctattt atttttgtga agaggcaaat catgcgcttt
241 gcaatgaaat ctcgaagggg acctcatgtc cctgtgggac acaatgcccc caaggacttg
301 aaagaggaga ttgatattcg actctccagg gttcaggata tcaagtatga gccccagctc
361 cttgcagatg atgatgctag actactacaa ctggaaaccc agggaaatca aagttgctac
421 aactatctgt ataggatgaa agctctggat gccattcgta cctctgagat cccatttcat
481 tctgaaggcc ggcatccccg ttccttaatg ggcaagaatt tccgctccta cctgctggat
541 ctgcgaaaca ctagtacgcc tttcaagggt gtacgcaaag cactcattga tacccttttg
601 gatggctatg aaacagcccg ctatgggaca ggggtctttg gccagaatga gtacctacgc
661 tatcaggagg ccctgagtga gctggccact gcgtgagttt ggaggggaac gtgtcagagg
721 gagctggtac agtagtgttg gactgttgcc acagtgcagt gaccttcata aagcatataa
781 acaaaatcca tgaaaaaaaa aaaaaaaaaa
//