LOCUS BC008302 2089 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens STE20-related kinase adaptor beta, mRNA (cDNA clone
MGC:15130 IMAGE:3546243), complete cds.
ACCESSION BC008302
VERSION BC008302.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2089)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2089)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: n Column: 23
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21359970.
FEATURES Location/Qualifiers
source 1..2089
/db_xref="H-InvDB:HIT000033709"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15130 IMAGE:3546243"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2089
/gene="STRADB"
/gene_synonym="CALS-21"
/gene_synonym="ILPIP"
/gene_synonym="ILPIPA"
/gene_synonym="PAPK"
/gene_synonym="PRO1038"
/db_xref="GeneID:55437"
/db_xref="HGNC:HGNC:13205"
/db_xref="MIM:607333"
CDS 268..1524
/gene="STRADB"
/gene_synonym="CALS-21"
/gene_synonym="ILPIP"
/gene_synonym="ILPIPA"
/gene_synonym="PAPK"
/gene_synonym="PRO1038"
/codon_start=1
/product="STE20-related kinase adaptor beta"
/protein_id="AAH08302.1"
/db_xref="GeneID:55437"
/db_xref="HGNC:HGNC:13205"
/db_xref="MIM:607333"
/translation="MSLLDCFCTSRTQVESLRPEKQSETSIHQYLVDEPTLSWSRPST
RASEVLCSTNVSHYELQVEIGRGFDNLTSVHLARHTPTGTLVTIKITNLENCNEERLK
ALQKAVILSHFFRHPNITTYWTVFTVGSWLWVISPFMAYGSASQLLRTYFPEGMSETL
IRNILFGAVRGLNYLHQNGCIHRSIKASHILISGDGLVTLSGLSHLHSLVKHGQRHRA
VYDFPQFSTSVQPWLSPELLRQDLHGYNVKSDIYSVGITACELASGQVPFQDMHRTQM
LLQKLKGPPYSPLDISIFPQSESRMKNSQSGVDSGIGESVLVSSGTHTVNSDRLHTPS
SKTFSPAFFSLVQLCLQQDPEKRPSASSLLSHVFFKQMKEESQDSILSLLPPAYNKPS
ISLPPVLPWTEPECDFPDEKDSYWEF"
BASE COUNT 569 a 486 c 422 g 612 t
ORIGIN
1 gcagagttcc aagcccacgg ccccggtcgc ggcctcgccg ccctcccgcg ccccgcgccg
61 ggagcgggcc tagagcgctc gcctcgcccc tccgcgagca gggctctggc gcccgcccct
121 gtccgcaccg ctggcagcct gaagagagtc gctggccgtg gtcgccgcta ggtaggatat
181 atctgcatct tgaaaggaag ataaaacaaa agccttcttt ggaatagatg gatttttgtc
241 actttctgtg tgaactaaag tgattcaatg tctcttttgg attgcttctg cacttcaaga
301 acacaagttg aatcactcag acctgaaaaa cagtctgaaa ccagtatcca tcaatacttg
361 gttgatgagc caaccctttc ctggtcacgt ccatccacta gagccagtga agtactatgt
421 tccaccaacg tttctcacta tgagctccaa gtagaaatag gaagaggatt tgacaacttg
481 acttctgtcc atcttgcacg gcatactccc acgggaacac tggtaactat aaaaattaca
541 aatctggaaa actgcaatga agaacgcctg aaagctttac agaaagccgt gattctatcc
601 cactttttcc ggcatcccaa tattacaact tattggacag ttttcactgt tggcagctgg
661 ctttgggtta tttctccatt tatggcctat ggttcagcaa gtcaactctt gaggacctat
721 tttcctgaag gaatgagtga aactttaata agaaacattc tctttggagc cgtgagaggg
781 ttgaactatc tgcaccaaaa tggctgtatt cacaggagta ttaaagccag ccatatcctc
841 atttctggtg atggcctagt gaccctctct ggcctttccc atctgcatag tttggttaag
901 catggacaga ggcatagggc tgtgtatgat ttcccacagt tcagcacatc agtgcagccg
961 tggctgagtc cagaactact gagacaggat ttacatgggt ataatgtgaa gtcagatatt
1021 tacagtgttg ggattacagc atgtgaatta gccagtgggc aggtgccttt ccaggacatg
1081 catagaactc agatgctgtt acagaaactg aaaggtcctc cttatagccc attggatatc
1141 agtattttcc ctcaatcaga atccagaatg aaaaattccc agtcaggtgt agactctggg
1201 attggagaaa gtgtgcttgt ctccagtgga actcacacag taaatagtga ccgattacac
1261 acaccatcct caaaaacttt ctctcctgcc ttctttagct tggtacagct ctgtttgcaa
1321 caagatcctg agaaaaggcc atcagcaagc agtttattgt cccatgtttt cttcaaacag
1381 atgaaagaag aaagccagga ttcaatactt tcactgttgc ctcctgctta taacaagcca
1441 tcaatatcat tgcctccagt gttaccttgg actgagccag aatgtgattt tcctgatgaa
1501 aaagactcat actgggaatt ctagggctgc caaatcattt tatgtcctat atacttgaca
1561 ctttctcctt gctgcttttt cttctgtatt tctaggtaca aataccagaa ttatacttga
1621 aaatacagtt ggtgcactgg agaatctatt atttaaaacc actctgttca aaggggcacc
1681 agtttgtagt ccctctgttt cgcacagagt actatgacaa ggaaacatca gaattactaa
1741 tctagctagt gtcatttatt ctggaatttt tttctaagct gtgactaact ctttttatct
1801 ctcaatataa tttttgagcc agttaatttt tttcagtatt ttgctgtccc ttgggaatgg
1861 gccctcagag gacagtgctt ccaagtacat cttctcccag attctctggc ctttttaatg
1921 agctattgtt aaaccaacag gctagtttat cttacatcag acccttttct ggtagaggga
1981 aaatgtttgt gctttccctt tttcttctgt taatacttat ggtaacacct aactgagcct
2041 cactcacatt aaatgattca cttgaaatat aaaaaaaaaa aaaaaaaaa
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