LOCUS BC008300 2205 bp mRNA linear HUM 03-NOV-2008
DEFINITION Homo sapiens pecanex-like 2 (Drosophila), mRNA (cDNA clone
IMAGE:2959567), complete cds.
ACCESSION BC008300
VERSION BC008300.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2205)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2205)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (25-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: b Column: 15
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2205
/db_xref="H-InvDB:HIT000033707"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2959567"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2205
/gene="PCNXL2"
/db_xref="GeneID:80003"
/db_xref="HGNC:HGNC:8736"
CDS 747..2012
/gene="PCNXL2"
/codon_start=1
/product="PCNXL2 protein"
/protein_id="AAH08300.2"
/db_xref="GeneID:80003"
/db_xref="HGNC:HGNC:8736"
/translation="MWVLLFCLVMASCQYSLLKSVQPDPASPIHGHNQIITYSRPIYF
CVLCGLILLLDTGAKARHPPSYVVYGLKLFSPVFLQSARDYLIVFLYCFPAISLLGLF
PQINTFCTYLLEQIDMLFFGGSAVSGITSAVYSVARSVLAAALLHAVCFSAVKEPWSM
QHIPALFSAFCGLLVALSYHLSRQSSDPSVLMSFIQCRLFPKFLHQNLAESAADPLPK
KMKDSVTDVLKWDLIVCAVVAVLSFAVSASTVFLSLRPFLSIVLFALAGAVGFVTHYV
LPQLRKHHPWMWISHPILKNKEYHQREVRDVAHLMWFERLYVWLQCFEKYILYPALIL
NALTIDAFLISNHRRLGTHWDIFLMIIAGMKLLRTSFCNPVYQFINLSFTVIFFHFDY
KDISESFLLDFFMVSILFSKVFLGYVRQK"
BASE COUNT 573 a 543 c 464 g 625 t
ORIGIN
1 gccaaatgag tccaacttcc tggaatttgt ctccctgtta gaatccatta atacttccaa
61 gatgacggca tccagtcaac tgaatggctc agctgagcag aatgaagaaa gtgggcttct
121 ccgagataac tgttcccagg aaaaaaagga ggaaatcctg gaaaatgaaa agcccagtgg
181 acacagttct aagcaaggaa aaccagattt gcaaagtcaa gaccatacta gcaccggccc
241 cgcatgcact cagcctgcca agaccacagc cttttttcag ggcaatagac aaagacagat
301 aatctacagg gtaacttccc aacaagatag ttctgtcttg caagtcatca gtgggcctga
361 aacatctgta caagaagaga tatctgtgga tgctatgcat gtcttcattg atgaacatgg
421 ggaaattaga tcctgttatt taaaatctgg aaatcagaaa gaaggccctt tacagcctct
481 accatcaaat aatgactgtc tctctcaggc tcgagagatg caggtcagct cctccagtac
541 cacaacttct gagagtcaag atccgtcttc tggggaccct gccgtcagtg cccttcagca
601 acagctgtta ctgatggtgg ctcgcaggac ccagtcggaa accccacgga actgaagaca
661 tcaaggagaa tgtactggcg attttactca ttgtcctggt ttccctcctt ggatttctga
721 ccttgagcca aggcttttgc aaagatatgt gggtgctcct cttctgcctc gtcatggcca
781 gctgccagta ctccctgcta aagagtgttc agcctgaccc cgcctcacca atacacggac
841 acaaccaaat cataacatat agcagaccaa tctatttttg tgtgctgtgt ggccttattt
901 tgcttcttga tacaggggcc aaagccaggc accctcccag ttacgttgtg tatggcctga
961 agctcttctc tccagtgttt ctacaatcag ctagggacta cttaatagta tttttatatt
1021 gcttccctgc tatttccctc cttgggctct tcccgcaaat caacactttc tgcacttatc
1081 ttttggagca aattgacatg ctgttttttg gtggttctgc tgtgtctggg ataacctcgg
1141 ctgtttacag tgtggcccgg agcgtcttgg ctgccgccct gctccacgca gtctgcttca
1201 gtgcagtgaa ggaaccgtgg agcatgcaac acatcccggc actgttttcg gccttctgtg
1261 gcctcttggt cgccctttct taccatctga gccgtcagag cagtgaccca tctgtactca
1321 tgtccttcat ccaatgcagg ctgtttccta aatttttaca tcaaaatctg gcagagtcag
1381 ctgctgaccc tctccccaag aagatgaaag attcagtgac ggatgtctta aaatgggatc
1441 tcatcgtctg cgcagtggtt gctgtcctct catttgcagt cagcgccagc actgtattcc
1501 tgtcattgcg accatttctc agcatcgtgc tgtttgcctt ggctggagcc gtggggtttg
1561 taacacatta cgtgctccct cagctccgca agcatcatcc ctggatgtgg atttcacacc
1621 ccattctcaa aaacaaagag tatcatcaac gggaagtgag agatgttgcc catttaatgt
1681 ggttcgaaag actctatgtt tggcttcagt gttttgaaaa atacatcttg tacccagcgc
1741 taattttgaa tgccctcact attgatgcat ttttaataag caatcaccgg agacttggta
1801 cccactggga catttttctg atgatcattg ctggcatgaa gctgttgcgg acatcattct
1861 gcaacccggt ttaccagttt attaacttga gcttcactgt catctttttc cactttgact
1921 acaaagatat ttcagagagc ttcttactgg atttcttcat ggtgtccatt ttatttagca
1981 aggtgtttct gggctacgtg aggcaaaaat aaaaacagag aaactcacca cagtgttttt
2041 ccttggatcc catgatgccc agatgctcta ctttttcctt ttacctttca gaaggtgttt
2101 ttataacatg taaaatccag ggttttcgtt gtaccaagta gaggaataag gaaaaataca
2161 ccaactccat atttccggaa gaaaaaaaaa aaaaaaaaaa aaaaa
//