LOCUS BC008198 2679 bp mRNA linear HUM 27-APR-2005
DEFINITION Homo sapiens solute carrier family 30 (zinc transporter), member 5,
mRNA (cDNA clone IMAGE:3048788), partial cds.
ACCESSION BC008198
VERSION BC008198.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2679)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2679)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: b Column: 19.
FEATURES Location/Qualifiers
source 1..2679
/db_xref="H-InvDB:HIT000033670"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3048788"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2679
/gene="SLC30A5"
/gene_synonym="FLJ12496"
/gene_synonym="FLJ12756"
/gene_synonym="MGC5499"
/gene_synonym="ZnT-5"
/gene_synonym="ZNT5"
/gene_synonym="ZNTL1"
/gene_synonym="ZTL1"
/db_xref="GeneID:64924"
/db_xref="MIM:607819"
CDS <1..1989
/gene="SLC30A5"
/gene_synonym="FLJ12496"
/gene_synonym="FLJ12756"
/gene_synonym="MGC5499"
/gene_synonym="ZnT-5"
/gene_synonym="ZNT5"
/gene_synonym="ZNTL1"
/gene_synonym="ZTL1"
/codon_start=1
/product="SLC30A5 protein"
/protein_id="AAH08198.2"
/db_xref="GeneID:64924"
/db_xref="MIM:607819"
/translation="IISLLWFFGLTLCGPLRTLLLFEHSDIVVISLLSVLFTSSGGGP
AKTRGAAFFIIAVICLLLFDNDDLMAKMAEHPEGHHDSALTHMLYTAIAFLGVADHKG
GVLLLVLALCCKVGFHTASRKLSVDVGGAKRLQALSHLVSVLLLCPWVIVLSVTTESK
VESWFSLIMPFATVIFFVMILDFYVDSICSVKMEVSKCARYGSFPIFISALLFGNFWT
HPITDQLRAMNKAAHQESTEHVLSGGVVVSAIFFILSANILSSPSKRGQKGTLIGYSP
EGTPLYNFMGDAFQHSSQSIPRFIKESLKQILEESDSRQIFYFLCLNLLFTFVELFYG
VLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYGRIEILSGFINGLF
LIVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSHAHSHAHGASQG
SCHSSDHSHSHHMHGHSDHGHGHSHGSAGGGMNANMRGVFLHVLADTLGSIGVIVSTV
LIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEYEKELHIALEKIQK
IEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNLTIQVE
KEAYFQHMSGLSTGFHDVLAMTKQMESMKYCKDGTYIM"
BASE COUNT 802 a 475 c 523 g 879 t
ORIGIN
1 attatttcac tcttgtggtt ttttggcctc actctttgtg gaccactaag gactttgctg
61 ctatttgagc acagtgatat tgttgtcatt tcactactca gtgttttgtt caccagttct
121 ggaggaggac cagcaaagac aaggggagct gcttttttca ttattgctgt gatctgttta
181 ttgctttttg acaatgatga tctcatggct aaaatggctg aacaccctga aggacatcat
241 gacagtgctc taactcatat gctttacaca gccattgcct tcttaggtgt ggcagatcac
301 aagggtggag tattattgct agtactggct ttgtgttgta aagttggttt tcatacagct
361 tccagaaagc tctctgtcga cgttggtgga gctaaacgtc ttcaagcttt atctcatctt
421 gtttctgtgc ttctcttgtg cccatgggtc attgttcttt ctgtgacaac tgagagtaaa
481 gtggagtctt ggttttctct cattatgcct tttgcaacgg ttatcttttt tgtcatgatc
541 ctggatttct acgtggattc catttgttca gtcaaaatgg aagtttccaa atgtgctcgt
601 tatggatcct ttcccatttt tattagtgct ctcctttttg gaaatttttg gacacatcca
661 ataacagacc agcttcgggc tatgaacaaa gcagcacacc aggagagcac tgaacacgtc
721 ctgtctggag gagtggtagt gagtgctata ttcttcattt tgtctgccaa tatcttatca
781 tctccctcta agagaggaca aaaaggtacc cttattggat attctcctga aggaacacct
841 ctttataact tcatgggtga tgcttttcag catagctctc aatcgatccc taggtttatt
901 aaggaatcac taaaacaaat tcttgaggag agtgactcta ggcagatctt ttacttcttg
961 tgcttgaatc tgctttttac ctttgtggaa ttattctatg gcgtgctgac caatagtctg
1021 ggcctgatct cggatggatt ccacatgctt tttgactgct ctgctttagt catgggactt
1081 tttgctgccc tgatgagtag gtggaaagcc actcggattt tctcctatgg gtacggccga
1141 atagaaattc tgtctggatt tattaatgga ctttttctaa tagtaatagc gttttttgtg
1201 tttatggagt cagtggctag attgattgat cctccagaat tagacactca catgttaaca
1261 ccagtctcag ttggagggct gatagtaaac cttattggta tctgtgcctt tagccatgcc
1321 catagccatg cccatggagc ttctcaagga agctgtcact catctgatca cagccattca
1381 catcatatgc atggacacag tgaccatggg catggtcaca gccacggatc tgcgggtgga
1441 ggcatgaatg ctaacatgag gggtgtattt ctacatgttt tggcagatac tcttggcagc
1501 attggtgtga tcgtatccac agttcttata gagcagtttg gatggttcat cgctgaccca
1561 ctctgttctc tttttattgc tatattaata tttctcagtg ttgttccact gattaaagat
1621 gcctgccagg ttctactcct gagattgcca ccagaatatg aaaaagaact acatattgct
1681 ttagaaaaga tacagaaaat tgaaggatta atatcatacc gagaccctca tttttggcgt
1741 cattctgcta gtattgtggc aggaacaatt catatacagg tgacatctga tgtgctagaa
1801 caaagaatag tacagcaggt tacaggaata cttaaagatg ctggagtaaa caatttaaca
1861 attcaagtgg aaaaggaggc atactttcaa catatgtctg gcctaagtac tggatttcat
1921 gatgttctgg ctatgacaaa acaaatggaa tccatgaaat actgcaaaga tggtacttac
1981 atcatgtgag ataactcaag aattacccct ggagaataaa caatgaagat taaatgactc
2041 agtatttgta atattgccag aaggataaaa attacacatt aactgtacag aaacagagtt
2101 ccctactact ggatcaagga atctttcttg aaggaaattt aaatacagaa tgaaacatta
2161 atggtaaaag tggagtaatt atttaaatta tgtgtataaa aggaatcaaa ttttgagtaa
2221 acatgatgta ttacatcatc ttcaaaaata gatatgatgg attctagtga agaccaaaat
2281 tacttctgtt tactttctat caggaagcat ctccattgta aatatgtatt tacatgttta
2341 ttacaaagac ccaaatgaaa aatttttagt ccattttttg catagcctaa agataaaata
2401 ggaataaaag ttctatattt atggattttc tgtatataaa actggtttct aattataact
2461 taagtccatt aagtaaaatc tgtattgcca ctttaaatgt aaactaaatt atttgggaga
2521 aacttcaacc actgatatga gataagcaat gagaataggg aagtgtataa catcacagtt
2581 tttgatgtat tacaaaaatc aaccactcta taaaataaat tttttttact tttggtaaaa
2641 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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