LOCUS BC008182 1474 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DnaJ (Hsp40) homolog, subfamily A, member 1, mRNA
(cDNA clone MGC:5217 IMAGE:2900892), complete cds.
ACCESSION BC008182
VERSION BC008182.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1474)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1474)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 3 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 49472820.
FEATURES Location/Qualifiers
source 1..1474
/db_xref="H-InvDB:HIT000033660"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:5217 IMAGE:2900892"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1474
/gene="DNAJA1"
/gene_synonym="DJ-2"
/gene_synonym="DjA1"
/gene_synonym="hDJ-2"
/gene_synonym="HDJ2"
/gene_synonym="HSDJ"
/gene_synonym="HSPF4"
/db_xref="GeneID:3301"
/db_xref="HGNC:HGNC:5229"
/db_xref="MIM:602837"
CDS 105..1298
/gene="DNAJA1"
/gene_synonym="DJ-2"
/gene_synonym="DjA1"
/gene_synonym="hDJ-2"
/gene_synonym="HDJ2"
/gene_synonym="HSDJ"
/gene_synonym="HSPF4"
/codon_start=1
/product="DnaJ (Hsp40) homolog, subfamily A, member 1"
/protein_id="AAH08182.1"
/db_xref="GeneID:3301"
/db_xref="HGNC:HGNC:5229"
/db_xref="MIM:602837"
/translation="MVKETTYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEK
FKQISQAYEVLSDAKKRELYDKGGEQAIKEGGAGGGFGSPMDIFDMFFGGGGRMQRER
RGKNVVHQLSVTLEDLYNGATRKLALQKNVICDKCEGRGGKKGAVECCPNCRGTGMQI
RIHQIGPGMVQQIQSVCMECQGHGERISPKDRCKSCNGRKIVREKKILEVHIDKGMKD
GQKITFHGEGDQEPGLEPGDIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKP
ISTLDNRTIVITSHPGQIVKHGDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFL
SPDKLSLLEKLLPERKEVEETDEMDQVELVDFDPNQERRRHYNGEAYEDDEHHPRGGV
QCQTS"
BASE COUNT 490 a 267 c 375 g 342 t
ORIGIN
1 gctcggtgag aggcggagga gcggtaacta ccccggctgc gcacagctcg gcgctccttc
61 ccgctccctc acacaccggc ctcagcccgc accggcagta gaagatggtg aaagaaacaa
121 cttactacga tgttttgggg gtcaaaccca atgctactca ggaagaattg aaaaaggctt
181 ataggaaact ggccttgaag taccatcctg ataagaaccc aaatgaagga gagaagttta
241 aacagatttc tcaagcttac gaagttctct ctgatgcaaa gaaaagggaa ttatatgaca
301 aaggaggaga acaggcaatt aaagagggtg gagcaggtgg cggttttggc tcccccatgg
361 acatctttga tatgtttttt ggaggaggag gaaggatgca gagagaaagg agaggtaaaa
421 atgttgtaca tcagctctca gtaaccctag aagacttata taatggtgca acaagaaaac
481 tggctctgca aaagaatgtg atttgtgaca aatgtgaagg tagaggaggt aagaaaggag
541 cagtagagtg ctgtcccaat tgccgaggta ctggaatgca aataagaatt catcagatag
601 gacctggaat ggttcagcaa attcagtctg tgtgcatgga gtgccagggc catggggagc
661 ggatcagtcc taaagataga tgtaaaagct gcaacggaag gaagatagtt cgagagaaga
721 aaattttaga agttcatatt gacaaaggca tgaaagatgg ccagaagata acattccatg
781 gtgaaggaga ccaagaacca ggactggagc caggcgatat tatcattgtg ttagatcaga
841 aggaccatgc tgtttttact cgacgaggag aagacctttt catgtgtatg gacatacagc
901 tcgttgaagc actgtgtggc ttccagaagc caatatctac tcttgacaac cgaaccatcg
961 tcatcacctc tcatccaggt cagattgtca agcatggaga tatcaagtgt gtactaaatg
1021 aaggcatgcc aatttatcgt agaccatatg aaaagggtcg cctaatcatc gaatttaagg
1081 taaactttcc tgagaatggc tttctctctc ctgataaact gtctttgctg gaaaaactcc
1141 tacccgagag gaaggaagtg gaagagactg atgagatgga ccaagtagaa ctggtggact
1201 ttgatccaaa tcaggaaaga cggcgccact acaatggaga agcatatgag gatgatgaac
1261 atcatcccag aggtggtgtt cagtgtcaga cctcttaatg ggccagtgaa taacactcac
1321 tgctggcatt taatgtgcag tagtgaatga gtgaaggact gtaatcataa tatgctcact
1381 acttgctctt gtttttgttt taataaacta tagtagtgtt ttaaaaagtt aaatgaagaa
1441 taaacgcaaa tataaaagca aaaaaaaaaa aaaa
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