LOCUS BC008134 1062 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens leucine rich repeat containing 16B, mRNA (cDNA clone
IMAGE:4153246), partial cds.
ACCESSION BC008134
VERSION BC008134.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1062)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1062)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 25, 2003 this sequence version replaced BC008134.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: David N. Louis, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: b Column: 6.
FEATURES Location/Qualifiers
source 1..1062
/db_xref="H-InvDB:HIT000087011"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4153246"
/tissue_type="Brain, anaplastic oligodendroglioma with
1p/19q loss"
/clone_lib="NCI_CGAP_Brn67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1062
/gene="LRRC16B"
/gene_synonym="crml-1"
/db_xref="GeneID:90668"
/db_xref="HGNC:HGNC:20272"
CDS <1..723
/gene="LRRC16B"
/gene_synonym="crml-1"
/codon_start=1
/product="LRRC16B protein"
/protein_id="AAH08134.2"
/db_xref="GeneID:90668"
/db_xref="HGNC:HGNC:20272"
/translation="GTEGSEPGEGGPAPGTAQQPRVHGVALPGLERAKGWSFDGKREG
PGPDQEGSTQAWQKRRSSDDAGPGSWKPPPPPQSTKPSFSAMRRAEATWHIAEESAPN
HSCQSPSPASQDGEEEKEGTLFPERTLPARNAKLQDPALAPWPPKPVAVPRGRQPPQE
PGVREEAEAGDAAPGVNKPRLRLSSQQDQEEPEVQGPPDPGRRTAPLKPKRTRRAQSC
DKLEPDRRRPPDPTGTSEPGTD"
BASE COUNT 267 a 345 c 317 g 133 t
ORIGIN
1 ggcactgagg ggtcagagcc aggggagggg ggcccagccc ctgggacagc acagcagcca
61 agggttcacg gtgttgccct tcccgggttg gaaagagcca agggttggag cttcgatggg
121 aaacgagagg gcccaggccc agaccaggag ggcagcaccc aggcctggca gaaacggcgc
181 tcttcagacg acgcagggcc tggatcctgg aagcccccac caccgcccca aagcaccaaa
241 ccaagcttca gcgccatgcg cagagcagag gccacatggc acatagctga agagagtgcc
301 cccaaccaca gctgccagag tcccagccca gcctcccaag atggggaaga ggagaaggag
361 gggaccctct tcccagagag gacacttcca gctaggaatg ccaagctaca ggaccccgct
421 ctagctccat ggcctcccaa gccagtggct gtgcccaggg gccgccagcc tccccaggag
481 ccaggggtca gggaggaggc tgaggctgga gatgcagctc caggagtcaa caaaccccgg
541 ctgaggctga gctcacagca agaccaagag gagcccgaag tccaagggcc ccctgatcca
601 ggccggcgga ctgcccccct gaagcccaag aggacacggc gggcacagtc ctgtgacaag
661 ctggaacctg atagaagacg gcctcctgac cccacaggaa ccagtgagcc aggaacagac
721 tgacaactgc cacaacaccc tcctcagccc tcgacatgtg cctcgcaagg actcagaccc
781 ctatccaccc ccagtcccca gggccccctg ccagcccctg tcctacaggg gcaagacggc
841 aggaccaggc atgggggagc tggaggcagg gactagaaca gagggagcca cctggagaga
901 cggaggctgt cagtgcctgc ctcgatacct ctctctgcag agagcttctg ggtgggggct
961 tatctcctcc cccaggaggg tggatctctg tccctctatc cccagggact ctctcccctc
1021 ttgtatagaa taaaaaaaca aaatcataaa aaaaaaaaaa aa
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