LOCUS BC008118 1239 bp mRNA linear HUM 30-SEP-2003
DEFINITION Homo sapiens polymerase (RNA) I polypeptide C, 30kDa, mRNA (cDNA
clone IMAGE:3448039), partial cds.
ACCESSION BC008118
VERSION BC008118.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1239)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 19 Row: m Column: 9.
FEATURES Location/Qualifiers
source 1..1239
/db_xref="H-InvDB:HIT000087005"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3448039"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_10"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..1239
/gene="POLR1C"
/gene_synonym="RPA39"
/gene_synonym="RPA40"
/gene_synonym="RPA5"
/gene_synonym="RPAC1"
/db_xref="GeneID:9533"
CDS <1..1018
/gene="POLR1C"
/gene_synonym="RPA39"
/gene_synonym="RPA40"
/gene_synonym="RPA5"
/gene_synonym="RPAC1"
/codon_start=2
/product="POLR1C protein"
/protein_id="AAH08118.1"
/db_xref="GeneID:9533"
/translation="EMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRFEKNFRVD
VVHMDENSLEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRL
GLIPIHADPRLFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKV
YTRHMTWIPLGNQADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFS
PVATASYRLLPDITLLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLDTFS
REIFRNEKLKKVVRLARVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDA
VQMD"
misc_feature 158..994
/gene="POLR1C"
/gene_synonym="RPA39"
/gene_synonym="RPA40"
/gene_synonym="RPA5"
/gene_synonym="RPAC1"
/note="RPOLD; Region: RNA polymerases D"
/db_xref="CDD:smart00662"
BASE COUNT 321 a 283 c 329 g 306 t
ORIGIN
1 ggaaatgcgg agccgcgtgg ttctggggga gtttggggtt cgcaatgtcc atactactga
61 ctttcccggt aactattccg gttatgatga tgcctgggac caggaccgct tcgagaagaa
121 tttccgtgtg gatgtagtac acatggatga aaactcactg gagtttgaca tggtgggaat
181 tgacgcagcc attgccaatg cttttcgacg aattctgcta gctgaggtgc caactatggc
241 tgtggagaag gtcctggtgt acaataatac atccattgtt caggatgaga ttcttgctca
301 ccgtctgggg ctcattccca ttcatgctga tccccgtctt tttgagtatc ggaaccaagg
361 agatgaagaa ggcacagaga tagatactct acagtttcgt ctccaggtca gatgcactcg
421 gaacccccat gctgctaaag attcctctga ccccaacgaa ctgtacgtga accacaaagt
481 gtataccagg catatgacat ggatccccct ggggaaccag gctgatctct ttccagaggg
541 cactatccga ccagtgcatg atgatatcct catcgctcag ctgcggcctg gccaagaaat
601 tgacctgctc atgcactgtg tcaagggcat tggcaaagat catgccaagt tttcaccagt
661 ggcaacagcc agttacaggc tcctgccaga catcaccctg cttgagcccg tggaagggga
721 ggcagctgag gagttgagca ggtgcttctc acctggtgtt attgaggtgc aggaagtcca
781 aggtaaaaag gtggccagag ttgccaaccc ccggctggat accttcagca gagaaatctt
841 ccggaatgag aagctaaaga aggttgtgag gcttgcccgg gttcgagatc attatatctt
901 ctctgttgag tcaacggggg tgttgccacc agatgtgctg gtgagtgaag ccatcaaagt
961 actgatgggg aagtgccggc gcttcttgga tgaactagat gcggttcaga tggactgagc
1021 ttggatgctt ctgaggcaag ctgaagcttt gggttctgac tgacccaccc tacaggactg
1081 ctgaacagag agcccagtgt gactagggat cctgagtttt ctgggacaat tccagcttta
1141 atcaatacat tttgttaaat gtgccataaa atgagacttt ttacgccttt ataaggcctt
1201 agatgtaaat aaactcaccc aaacaaaaaa aaaaaaaaa
//