LOCUS BC008082 1672 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens WD repeat domain 12, mRNA (cDNA clone MGC:835
IMAGE:3050219), complete cds.
ACCESSION BC008082
VERSION BC008082.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1672)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1672)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC008082.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 16445423.
FEATURES Location/Qualifiers
source 1..1672
/db_xref="H-InvDB:HIT000033639"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:835 IMAGE:3050219"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1672
/gene="WDR12"
/gene_synonym="FLJ10881"
/gene_synonym="FLJ12719"
/gene_synonym="FLJ12720"
/gene_synonym="YTM1"
/db_xref="GeneID:55759"
/db_xref="HGNC:HGNC:14098"
CDS 131..1402
/gene="WDR12"
/gene_synonym="FLJ10881"
/gene_synonym="FLJ12719"
/gene_synonym="FLJ12720"
/gene_synonym="YTM1"
/codon_start=1
/product="WD repeat domain 12"
/protein_id="AAH08082.1"
/db_xref="GeneID:55759"
/db_xref="HGNC:HGNC:14098"
/translation="MAQLQTRFYTDNKKYAVDDVPFSIPAASEIADLSNIINKLLKDK
NEFHKHVEFDFLIKGQFLRMPLDKHMEMENISSEEVVEIEYVEKYTAPQPEQCMFHDD
WISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIVGHTDVVKDVAWVKKDSLSCLLLS
ASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWDKMLKIWST
VPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASW
DHTIRVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLV
SLSLTSHTGWVTSVKWSPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSV
DWTDTGLLLSGGADNKLYSYRYSPTTSHVGA"
BASE COUNT 508 a 312 c 375 g 477 t
ORIGIN
1 ctgcagttcc tcgcttacct gtgcagtcta attttgagct gcctctttgt agtcttaaaa
61 ggcaggagct tcgtgttgtg ggtctgctaa cccgtacgtt tccgtgggca agtcgtgtgt
121 actcctcgcc atggctcagc tccaaacacg cttctacact gataacaaga aatatgccgt
181 agatgatgtt cccttctcaa tccctgctgc ctctgaaatt gccgacctta gtaacatcat
241 caataaacta ctaaaggaca aaaatgagtt ccacaaacat gtggagtttg atttccttat
301 taagggccag tttctgcgaa tgcccttgga caaacacatg gaaatggaga acatctcatc
361 agaagaagtt gtggaaatag aatacgtgga gaagtatact gcaccccagc cagagcaatg
421 catgttccat gatgactgga tcagttcaat taaaggggca gaggaatgga tcttgactgg
481 ttcttatgat aagacttctc ggatctggtc cttggaagga aagtcaataa tgacaattgt
541 gggacatacg gatgttgtaa aagatgtggc ctgggtgaaa aaagatagtt tgtcctgctt
601 attattgagt gcttctatgg atcagactat tctcttatgg gagtggaatg tagagagaaa
661 caaagtgaaa gccctacact gctgtagagg tcatgctgga agtgtagatt ctatagctgt
721 tgatggctca ggaactaaat tttgcagtgg ctcctgggat aagatgctaa agatctggtc
781 tacagtccct acagatgaag aagatgaaat ggaggagtcc acaaatcgac caagaaagaa
841 acagaagaca gaacagttgg gactaacaag gactcccata gtgaccctct ctggccacat
901 ggaggcagtt tcctcagttc tgtggtcaga tgctgaagaa atctgcagtg catcttggga
961 ccatacaatt agagtgtggg atgttgagtc tggcagtctt aagtcaactt tgacaggaaa
1021 taaagtgttt aattgtattt cctattctcc actttgtaaa cgtttagcat ctggaagcac
1081 agataggcat atcagactgt gggatccccg aactaaagat ggttctttgg tgtcgctgtc
1141 cctaacgtca catactggtt gggtgacatc agtaaaatgg tctcctaccc atgaacagca
1201 gctgatttca ggatctttag ataacattgt taagctgtgg gatacaagaa gttgtaaggc
1261 tcctctctat gatctggctg ctcatgaaga caaagttctg agtgtagact ggacagacac
1321 agggctactt ctgagtggag gagcagacaa taaattgtat tcctacagat attcacctac
1381 cacttcccat gttggggcat gaaagtgaac aataatttga ctatagagat tatttctgta
1441 aatgaaattg gtagagaacc atgaaattac atagatgcag atgcagaaag cagccttttg
1501 aagtttatat aatgttttca cccttcataa cagctaacgt atcacttttt cttattttgt
1561 atttataata agataggttg tgtttataaa atacaaactg tggcatacat tctctataca
1621 aacttgaaat taaactgagt tttacatttc tctttaaaaa aaaaaaaaaa aa
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