LOCUS BC008081 1169 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein
retention receptor 2, mRNA (cDNA clone MGC:655 IMAGE:2966703),
complete cds.
ACCESSION BC008081
VERSION BC008081.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1169)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1169)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC008081.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 3 Row: g Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8051609.
FEATURES Location/Qualifiers
source 1..1169
/db_xref="H-InvDB:HIT000033638"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:655 IMAGE:2966703"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1169
/gene="KDELR2"
/gene_synonym="ELP-1"
/gene_synonym="ERD2.2"
/db_xref="GeneID:11014"
/db_xref="HGNC:HGNC:6305"
CDS 66..704
/gene="KDELR2"
/gene_synonym="ELP-1"
/gene_synonym="ERD2.2"
/codon_start=1
/product="KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum
protein retention receptor 2"
/protein_id="AAH08081.1"
/db_xref="GeneID:11014"
/db_xref="HGNC:HGNC:6305"
/translation="MNIFRLTGDLSHLAAIVILLLKIWKTRSCAGISGKSQLLFALVF
TTRYLDLFTSFISLYNTSMKVIYLACSYATVYLIYLKFKATYDGNHDTFRVEFLVVPV
GGLSFLVNHDFSPLEILWTFSIYLESVAILPQLFMISKTGEAETITTHYLFFLGLYRA
LYLVNWIWRFYFEGFFDLIAVVAGVVQTILYCDFFYLYITKVLKGKKLSLPA"
BASE COUNT 305 a 283 c 233 g 348 t
ORIGIN
1 ccgcctcctg agccgcccag ccccggggcc gccgcgctgc gccgaccgcc accgccgccg
61 ccgccatgaa cattttccgg ctgactgggg acctgtccca cctggcggcc atcgtcatcc
121 tgctgctgaa gatctggaag acgcgctcct gcgccggtat ttctgggaaa agccagcttc
181 tgtttgcact ggtcttcaca actcgttacc tggatctttt tacttcattt atttcattgt
241 ataacacatc tatgaaggtt atctaccttg cctgctccta tgccacagtg tacctgatct
301 acctgaaatt taaggcaacc tacgatggaa atcatgatac cttccgagtg gagtttctgg
361 tggtccctgt gggaggcctc tcatttttag ttaatcacga tttctctcct cttgagatcc
421 tctggacctt ctccatctac ctggagtccg tggctatcct tccgcagctg tttatgatca
481 gcaagactgg ggaggccgag accatcacca cccactacct gttcttcctg ggcctctatc
541 gtgctttgta tcttgtcaac tggatctggc gcttctactt tgagggcttc tttgacctca
601 ttgctgtggt ggccggcgta gtccagacca tcctatactg tgacttcttc tacttgtaca
661 ttacaaaagt actcaaggga aagaagctca gtttgccagc ataagtgcca aagaccatca
721 ccagcatctg tccttcaggg tgctcggaca gaattcttac cacagcaaag gcataagatg
781 cttgatacgg aaaatcagaa acttaactct tttgttgcag atagtcatca gtggctctgt
841 aaaaacgcag aggaaaagag ccagaaggtt tctgtttaat gcatcttgcc ttatcttttt
901 ttattactgt gtacaaagat ttttttacac aaagaaactt aatgctgtat taataaattc
961 agtgtgtagc ttcaattggg atagttccaa aagtgaagat tttgtgagga ataagtgcaa
1021 attttttttt tattttaaaa aattctttga aactcttaag tctttgtgtc tgcaatgaaa
1081 ttgtactcct tgacagttga tagattatat attcttccat ccctcaaacc taaaaaaaaa
1141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
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