LOCUS BC008054 1731 bp mRNA linear HUM 01-FEB-2005
DEFINITION Homo sapiens transmembrane protein 43, mRNA (cDNA clone
IMAGE:3835133), partial cds.
ACCESSION BC008054
VERSION BC008054.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1731)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1731)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC008054.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 24 Row: b Column: 16.
FEATURES Location/Qualifiers
source 1..1731
/db_xref="H-InvDB:HIT000033617"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3835133"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1731
/gene="TMEM43"
/gene_synonym="DKFZp586G1919"
/gene_synonym="MGC3222"
/db_xref="GeneID:79188"
CDS <1..947
/gene="TMEM43"
/gene_synonym="DKFZp586G1919"
/gene_synonym="MGC3222"
/codon_start=3
/product="TMEM43 protein"
/protein_id="AAH08054.2"
/db_xref="GeneID:79188"
/translation="RLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEES
REYTEDGQVKKETRYSYNTEWRSEIINSKNFDREIGHKNPSAMAVESFMATAPFVQIG
RFFLSSGLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYA
GLSGDDPDLGPAHVVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEEVFHRELRSN
SMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDLVNIGLKAFAFCVATSLTLL
TVAAGWLFYRPLWALLIAGLALVPILVARTRVPAKKLE"
BASE COUNT 400 a 486 c 441 g 404 t
ORIGIN
1 gaaggctggt gcacatcatt ggcgccttac ggacatccaa gcttttgtct gatccaaact
61 atggggtcca tcttccggct gtgaaactgc ggaggcacgt ggagatgtac caatgggtag
121 aaactgagga gtccagggag tacaccgagg atgggcaggt gaagaaggag acgaggtatt
181 cctacaacac tgaatggagg tcagaaatca tcaacagcaa aaacttcgac cgagagattg
241 gccacaaaaa ccccagtgcc atggcagtgg agtcattcat ggcaacagcc ccctttgtcc
301 aaattggcag gtttttcctc tcgtcaggcc tcatcgacaa agtcgacaac ttcaagtccc
361 tgagcctatc caagctggag gaccctcatg tggacatcat tcgccgtgga gactttttct
421 accacagcga aaatcccaag tatccagagg tgggagactt gcgtgtctcc ttttcctatg
481 ctggactgag cggcgatgac cctgacctgg gcccagctca cgtggtcact gtgattgccc
541 ggcagcgggg tgaccagcta gtcccattct ccaccaagtc tggggatacc ttactgctcc
601 tgcaccacgg ggacttctca gcagaggagg tgtttcatag agaactaagg agcaactcca
661 tgaagacctg gggcctgcgg gcagctggct ggatggccat gttcatgggc ctcaacctta
721 tgacacggat cctctacacc ttggtggact ggtttcctgt tttccgagac ctggtcaaca
781 ttggcctgaa agcctttgcc ttctgtgtgg ccacctcgct gaccctgctg accgtggcgg
841 ctggctggct cttctaccga cccctgtggg ccctcctcat tgccggcctg gcccttgtgc
901 ccatccttgt tgctcggaca cgggtgccag ccaaaaagtt ggagtgaaaa gaccctggca
961 cccgcccgac acctgcgtga gccctaggat ccaggtcctc tctcacctct gacccagctc
1021 catgccagag caggagcccc ggtcaatttt ggactctgca ccccctctcc tcttcagggg
1081 ccagacttgg cagcatgtgc accaggttgg tgttcaccag ctcatgtctt ccccacatct
1141 cttcttgcca gtaagcagct ttggtgggca gcagcagctc atgaatggca agctgacagc
1201 ttctcctgct gtttccttcc tctcttggac tgagtgggta cggccagcca ctcagcccat
1261 tggcagctga caacgcagac acgctctacg gaggcctgct gataaagggc tcagccttgc
1321 cgtgtgctgc ttctcatcac tgcacacaag tgccatgctt tgccaccacc accaagcaca
1381 tctgtgatcc tgaagggcgg ccgttagtca ttactgctga gtcctgggtc accagcagac
1441 acactgggca tggacccctc aaagcaggca cacccaaaac acaagtctgt ggctagaacc
1501 tgatgtggtg tttaaaagag aagaaacact gaagatgtcc tgaggagaaa agctggacat
1561 atactgggct tcacacttat cttatggctt ggcagaatct ttgtagtgtg tgggatctct
1621 gaaggcccta tttaagtttt tcttcgttac tttgctgctt catgtgtact ttcctacccc
1681 aagaggaagt tttctgaaat aagatttaaa aaaaaaaaaa aaaaaaaaaa a
//