LOCUS BC008045 1411 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens SERPINE1 mRNA binding protein 1, mRNA (cDNA clone MGC:16069 IMAGE:3615828), complete cds. ACCESSION BC008045 VERSION BC008045.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1411) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1411) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC008045.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC/DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 24 Row: m Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: Hexamer frequency ORF analysis, Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1411 /db_xref="H-InvDB:HIT000033612" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:16069 IMAGE:3615828" /tissue_type="Skin, melanotic melanoma." /clone_lib="NIH_MGC_20" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1411 /gene="SERBP1" /gene_synonym="CGI-55" /gene_synonym="CHD3IP" /gene_synonym="DKFZp564M2423" /gene_synonym="HABP4L" /gene_synonym="PAI-RBP1" /gene_synonym="PAIRBP1" /db_xref="GeneID:26135" /db_xref="HGNC:HGNC:17860" /db_xref="MIM:607378" CDS 72..1298 /gene="SERBP1" /gene_synonym="CGI-55" /gene_synonym="CHD3IP" /gene_synonym="DKFZp564M2423" /gene_synonym="HABP4L" /gene_synonym="PAI-RBP1" /gene_synonym="PAIRBP1" /codon_start=1 /product="SERPINE1 mRNA binding protein 1" /protein_id="AAH08045.1" /db_xref="GeneID:26135" /db_xref="HGNC:HGNC:17860" /db_xref="MIM:607378" /translation="MPGHLQEGFGCVVTNRFDQLFDDESDPFEVLKAAENKKKEAGGG GVGGPGAKSAAQAAAQTNSNAAGKQLRKESQKDRKNPLPPSVGVVDKKEETQPPVALK KEGIRRVGRRPDQQLQGEGKIIDRRPERRPPRERRFEKPLEEKGEGGEFSVDRPIIDR PIRGRGGLGRGRGGRGRGMGRGDGFDSRGKREFDRHSGSDRSSFSHYSGLKHEDKRGG SGSHNWGTVKDELTESPKYIQKQISYNYSDLDQSNVTEETPEGEEHHPVADTENKENE VEEVKEEGPKEMTLDEWKAIQNKDRAKVEFNIRKPNEGADGQWKKGFVLHKSKSEEAH AEDSVMDHHFRKPANDITSQLEINFGDLGRPGRGGRGGRGGRGRGGRPNRGSRTDKSS ASAPDVDDPEAFPALA" BASE COUNT 436 a 298 c 414 g 263 t ORIGIN 1 ctgaagcagg cgctcttggc tcggcgcggc ccgctgcaat ccgtggagga acgcgccgcc 61 gagccaccat catgcctggg cacttacagg aaggcttcgg ctgcgtggtc accaaccgat 121 tcgaccagtt atttgacgac gaatcggacc ccttcgaggt gctgaaggca gcagagaaca 181 agaaaaaaga agccggcggg ggcggcgttg ggggccctgg ggccaagagc gcagctcagg 241 ccgcggccca gaccaactcc aacgcggcag gcaaacagct gcgcaaggag tcccagaaag 301 accgcaagaa cccgctgccc cccagcgttg gcgtggttga caagaaagag gagacgcagc 361 cgcccgtggc gcttaagaaa gaaggaataa gacgagttgg aagaagacct gatcaacaac 421 ttcagggtga agggaaaata attgatagaa gaccagaaag gcgaccacct cgtgaacgaa 481 gattcgaaaa gccacttgaa gaaaagggtg aaggaggcga attttcagtt gatagaccga 541 ttattgaccg acctattcga ggtcgtggtg gtcttggaag aggtcgaggg ggccgtggac 601 gtggaatggg ccgaggagat ggatttgatt ctcgtggcaa acgtgaattt gataggcata 661 gtggaagtga tagatcttct ttttcacatt acagtggcct gaagcacgag gacaaacgtg 721 gaggtagcgg atctcacaac tggggaactg tcaaagacga attaacagag tcccccaaat 781 acattcagaa acaaatatct tataattaca gtgacttgga tcaatcaaat gtgactgagg 841 aaacacctga aggtgaagaa catcatccag tggcagacac tgaaaataag gagaatgaag 901 ttgaagaggt aaaagaggag ggtccaaaag agatgacttt ggatgagtgg aaggctattc 961 aaaataagga ccgggcaaaa gtagaattta atatccgaaa accaaatgaa ggtgctgatg 1021 ggcagtggaa gaagggattt gttcttcata aatcaaagag tgaagaggct catgctgaag 1081 attcggttat ggaccatcat ttccggaagc cagcaaatga tataacgtct cagctggaga 1141 tcaattttgg agaccttggc cgcccaggac gtggcggcag gggaggacga ggtggacgtg 1201 ggcgtggtgg gcgcccaaac cgtggcagca ggaccgacaa gtcaagtgct tctgctcctg 1261 atgtggatga cccagaggca ttcccagctc tggcttaact ggatgccata agacaaccct 1321 ggttcctttg tgaacccttc tgttcaaagc ttttgcatgc ttaaggattc caaacgacta 1381 agaaattaaa aaaaaaaaaa aaaaaaaaaa a //