LOCUS BC008035 1940 bp mRNA linear HUM 01-OCT-2003
DEFINITION Homo sapiens BTB (POZ) domain containing 2, mRNA (cDNA clone
IMAGE:2959664), partial cds.
ACCESSION BC008035
VERSION BC008035.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1940)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1940)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (21-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Oct 1, 2003 this sequence version replaced BC008035.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 2 Row: g Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20127579.
FEATURES Location/Qualifiers
source 1..1940
/db_xref="H-InvDB:HIT000033602"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:2959664"
/tissue_type="Colon, adenocarcinoma"
/clone_lib="NIH_MGC_15"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1940
/gene="BTBD2"
/gene_synonym="FLJ20386"
/db_xref="GeneID:55643"
CDS <1..862
/gene="BTBD2"
/gene_synonym="FLJ20386"
/codon_start=2
/product="BTBD2 protein"
/protein_id="AAH08035.2"
/db_xref="GeneID:55643"
/translation="LCLENIDKNTADAITAEGFTDIDLDTLVAVLERDTLGIREVRLF
NAVVRWSEAECQRQQLQVTPENRRKVLGKALGLIRFPLMTIEEFAAGPAQSGILVDRE
VVSLFLHFTVNPKPRVEFIDRPRCCLRGKECSINRFQQVESRWGYSGTSDRIRFSVNK
RIFVVGFGLYGSIHGPTDYQVNIQIIHTDSNTVLGQNDTGFSCDGSASTFRVMFKEPV
EVLPNVNYTACATLKGPDSHYGTKGLRKVTHESPTTGAKTCFTFCYAAGNNNGTSVED
GQIPEVIFYT"
BASE COUNT 372 a 669 c 559 g 340 t
ORIGIN
1 cctgtgcctg gagaacatcg acaaaaacac tgcagacgcc atcaccgcgg agggcttcac
61 cgacattgac ctggacacgc tggtggctgt cctggagcgc gacacactgg gcatccgtga
121 ggtgcggctg ttcaatgccg ttgtccgctg gtccgaggcc gagtgtcagc ggcagcagct
181 gcaggtgacg ccagagaaca ggcggaaggt tctgggcaag gccctgggcc tcattcgctt
241 cccgctcatg accatcgagg agttcgctgc aggtcccgca cagtcgggca tcctggtgga
301 ccgcgaggtg gtcagcctct tcctgcactt caccgtcaac cccaagccac gagtggagtt
361 cattgaccgg ccccgctgct gcctgcgtgg gaaggagtgc agcatcaacc gcttccagca
421 ggtggagagt cgctggggct acagcgggac cagtgaccgc atcaggttct cagtcaacaa
481 gcgcatcttc gtggtgggat ttgggctgta tggatccatc cacgggccca ccgactacca
541 agtgaacatc cagattattc acaccgatag caacaccgtc ttgggccaga acgacacggg
601 cttcagctgc gacggctcag ccagcacctt ccgcgtcatg ttcaaggagc cggtggaggt
661 gctgcccaac gtcaactaca cggcctgtgc cacgctcaag ggcccagact cccactacgg
721 caccaaaggc ctgcgcaagg tgacacacga gtcgcccacc acgggcgcca agacctgctt
781 caccttttgc tacgcggccg ggaacaacaa tggcacatcc gtggaggatg gccagatccc
841 cgaggtcatc ttctacacct aggctgcccg acaccgacac cgccctccct ccgcggggat
901 agccgcagcc ccaggccatc atctgctgct ggggtccccc caccacgcgg tgccaggccc
961 agtgtccccc aggccgtctg tccactccat gccacctttc tcagcatcag gacggggttg
1021 ccctgtgttc accacgagtg tggctgctgg atcagggcag ccggggaggt ggccaggcca
1081 gtggccaggc cctgtggaga caatccctca ggactaggga cagggctgtg ccggcctggg
1141 ccagggccca cggacccgca gctcagggcg cctgcccacg tcgtctgccg gcggtgcgcc
1201 gcgggcgtcc ctcgcgtctc ttcactgcac attgcaatgc atttgcgatt cccatttctc
1261 tgctaggagc cagcctgggt ggcgctgctc ccagagccgt gggtcccaga ccttgcgttc
1321 cttttgttcc tgtccgttta tcaggacacg ggccccacct gtcacgtgcc cgaggccacc
1381 caagcccagc ctgcggggcg ttcccactgc ctggatgccg gcttgagttc tgcgcacgca
1441 ggattcagtg tggggacggc ccctgccgga taggcctagc cctggcccag gtggtgagcg
1501 gtttgcagtg tccgttctca tccacctgat gggcccagat aaaggccccc gctgtccagc
1561 ctccctggac ggccctcgcg gtccctgcag cccaagatgg gactcagacc ctgtgcccca
1621 gagctcccct gccgcagaat ggggccccag ccggccccga ccgggtccag gagcactgct
1681 cgcctgtaca tactgttgcc ctagcccacc tggtgccgtg ggagccaccc ccaggtgctg
1741 ggggcacagc ccctccccac tccggccacg cccccaccca ccccgcgtgt ttctgccctg
1801 tgactcctgg aacctgcgtc ctccccaaag ccatgggagg ggtgtcctcc tcagaccatg
1861 cccccagatg atttttttaa ataaagaaac aaatgcacct gcaaaaaaaa aaaaaaaaaa
1921 aaaaaaaaaa aaaaaaaaaa
//