LOCUS BC008020 2604 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) activator subunit 3
(PA28 gamma; Ki), mRNA (cDNA clone MGC:15945 IMAGE:3537911),
complete cds.
ACCESSION BC008020
VERSION BC008020.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2604)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2604)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (15-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 30410795.
FEATURES Location/Qualifiers
source 1..2604
/db_xref="H-InvDB:HIT000033594"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15945 IMAGE:3537911"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2604
/gene="PSME3"
/gene_synonym="Ki"
/gene_synonym="PA28-gamma"
/gene_synonym="PA28G"
/gene_synonym="REG-GAMMA"
/db_xref="GeneID:10197"
/db_xref="HGNC:HGNC:9570"
/db_xref="MIM:605129"
CDS 149..913
/gene="PSME3"
/gene_synonym="Ki"
/gene_synonym="PA28-gamma"
/gene_synonym="PA28G"
/gene_synonym="REG-GAMMA"
/codon_start=1
/product="proteasome (prosome, macropain) activator
subunit 3 (PA28 gamma; Ki)"
/protein_id="AAH08020.1"
/db_xref="GeneID:10197"
/db_xref="HGNC:HGNC:9570"
/db_xref="MIM:605129"
/translation="MASLLKVDQEVKLKVDSFRERITSEAEDLVANFFPKKLLELDSF
LKEPILNIHDLTQIHSDMNLPVPDPILLTNSHDGLDGPTYKKRRLDECEEAFQGTKVF
VMPNGMLKSNQQLVDIIEKVKPEIRLLIEKCNTVKMWVQLLIPRIEDGNNFGVSIQEE
TVAELRTVESEAASYLDQISRYYITRAKLVSKIAKYPHVEDYRRTVTEIDEKEYISLR
LIISELRNQYVTLHDMILKNIEKIKRPRSSNAETLY"
BASE COUNT 660 a 622 c 590 g 732 t
ORIGIN
1 agagggaggg agcgagcgag cagtgagtaa gccagcaagg gcggtcgggt cccgaggtca
61 gccgagattt ctcaggtccc tccggccccc tccctggagt ccacagcgcc tccggtgtcc
121 agaggatcgg acacggcccg gcccggccat ggcctcgttg ctgaaggtgg atcaggaagt
181 gaagctcaag gttgattctt tcagggagcg gatcacaagt gaggcagaag acttggtggc
241 aaattttttc ccaaagaagt tattagaact tgatagtttt ctgaaggaac caatcttaaa
301 catccatgac ctaactcaga tccactctga catgaatctc ccagtccctg accccattct
361 tctcaccaat agccatgatg gactggatgg tcccacttat aagaagcgaa ggttggatga
421 gtgtgaagaa gccttccaag gaaccaaggt gtttgtgatg cccaatggga tgctgaaaag
481 caaccagcag ctggtggaca ttattgagaa agtgaaacct gagatccggc tgttgattga
541 gaaatgtaac acggtcaaaa tgtgggtaca gctcctgatt cccaggatag aagatggaaa
601 caactttggg gtgtccattc aggaggaaac agttgcagag ctaagaactg ttgagagtga
661 agctgcatct tatctggacc agatttctag atattatatt acaagagcca aattggtttc
721 taaaatagct aaatatcccc atgtggagga ctatcgccgc accgtgacag agattgatga
781 gaaagaatat atcagccttc ggctcatcat atcagagctg aggaatcaat atgtcactct
841 acatgacatg atcctgaaaa atatcgagaa gatcaaacgg ccccggagca gcaatgcaga
901 gactctgtac tgaggccagg gccagggcca ggggactctg tgagtctggc tcaagaccga
961 cattgccttg gtttgttaca tgactatcgt gatggggaaa ctggctggaa atagtaatca
1021 cacctctctg tttttagtta gagtctaatg aaactctcat ctagttctgt gatgtgttta
1081 cctctttttt caggcctcag gaactcttct atttccttcc ctaatacccc acacccaacc
1141 tgtcgtaatt tctggagaac tccaggtttg tgtgtgcagg atgttggcac aaaaatacct
1201 gtgttttcat tctccccctc tctccctcct gtgtcttgcg ctttatgttt tcttccgttt
1261 gataattagt tggttaaaag ctgagggaac cggaaggaaa gtgctaggtg ttttttagga
1321 actagggtgg cggggggacg aacttctctt cctcacatga ggttactgtt tctttcctct
1381 gtggggcatt ggatcctccc acagttgccc tggtgatgac ttagggcttc ccatctgtgt
1441 acatcccact ttgaatcttg atcgtgacaa gaaatacctt aggccttcag tcaattccga
1501 agctccttca gttgttttta taatgggcgt tttcacatgc acatatgtgt atgcatgtat
1561 acgcccatac agacatgcac acacagactc ctactccatt agctaacata ccctccctct
1621 ccacaacccc tgtcacatac ctttcaggag gtgacagttg tcttagttgt catctaccca
1681 gacaaacgtc ctgggcccgt cctccctcct gatactgtag cctcttggta cccagggtga
1741 gttggtggag aacagagaga tgagaagcag agggcttggg gaaagcctgt tcctctctga
1801 ctcagccctt tttggcatta ttgcaagagc ttgactcctg gttgcctttt cccagccagt
1861 tttcagttgg ggtgaaggtt tctgcaagtg tgaggtccag atgctgctgc tcatgttggg
1921 ctttcctttt gggaactatt tctctttatt tatagtgtcg ggcttccggg gaaagcaatc
1981 attggtgtgt atgtgtatgt gcatgcacac acgtgcatat acacatttgt gtatgtggaa
2041 atgtgctggg caagtcaaaa ctatagaaga gttgcctcct gtctctcgaa tcttccagag
2101 atatcactta attgttaaca gcttttgtgt taatcccctt cagcccctag ctcttttatt
2161 ctaccacggc tggagagttg atacctgcag tcagcctgcc agtgactctt agtgtctgtt
2221 tctgacttat ttttcctgtc tctgtcttcc aacccccaat aatatttcca ccggggatgc
2281 atcattttta ctcccaatat tctgtagaga gggagtcagg atgctgtctt cccacgaata
2341 gtactcagta acaaaccaat tgcattttag ttgggcagtg ctcccaccca ccctccagat
2401 cccttccagc taaaaccctt cccccttccc tccatgtgtt tctcagtttc ccgtttcgtt
2461 tgttggactg ttccactgcc cctcctcctc accctatcac ccatggatcg taatgtaaaa
2521 ttcttttacc atgtcaagaa attattaaaa atacaggtac tttgaaaaaa aaaaaaaaaa
2581 aaaaaaaaaa aaaaaaaaaa aaac
//