LOCUS       BC007963                1060 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens major histocompatibility complex, class II, DP beta 1,
            mRNA (cDNA clone MGC:14112 IMAGE:4309717), complete cds.
ACCESSION   BC007963
VERSION     BC007963.2
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1060)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1060)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (11-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     On Dec 9, 2003 this sequence version replaced BC007963.1.
            Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Louis Staudt
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 20 Row: p Column: 2
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 24797075.
FEATURES             Location/Qualifiers
     source          1..1060
                     /db_xref="H-InvDB:HIT000033558_04"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:14112 IMAGE:4309717"
                     /tissue_type="Primary B-Cells from Tonsils"
                     /clone_lib="NIH_MGC_48"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1060
                     /gene="HLA-DPB1"
                     /gene_synonym="DPB1"
                     /gene_synonym="MHC DPB1"
                     /db_xref="GeneID:3115"
                     /db_xref="HGNC:HGNC:4940"
                     /db_xref="MIM:142858"
     CDS             34..810
                     /gene="HLA-DPB1"
                     /gene_synonym="DPB1"
                     /gene_synonym="MHC DPB1"
                     /codon_start=1
                     /product="major histocompatibility complex, class II, DP
                     beta 1"
                     /protein_id="AAH07963.1"
                     /db_xref="GeneID:3115"
                     /db_xref="HGNC:HGNC:4940"
                     /db_xref="MIM:142858"
                     /translation="MMVLQVSAAPRTVALTALLMVLLTSVVQGRATPENYLFQGRQEC
                     YAFNGTQRFLERYIYNREEFVRFDSDVGEFRAVTELGRPAAEYWNSQKDILEEKRAVP
                     DRMCRHNYELGGPMTLQRRVQPRVNVSPSKKGPLQHHNLLVCHVTDFYPGSIQVRWFL
                     NGQEETAGVVSTNLIRNGDWTFQILVMLEMTPQQGDVYTCQVEHTSLDSPVTVEWKAQ
                     SDSARSKTLTGAGGFVLGLIICGVGIFMHRRSKKVQRGSA"
BASE COUNT          250 a          278 c          296 g          236 t
ORIGIN      
        1 gctcttttca ttttgccatc cttttccagc tccatgatgg ttctgcaggt ttctgcggcc
       61 ccccggacag tggctctgac ggcgttactg atggtgctgc tcacatctgt ggtccagggc
      121 agggccactc cagagaatta ccttttccag ggacggcagg aatgctacgc gtttaatggg
      181 acacagcgct tcctggagag atacatctac aaccgggagg agttcgtgcg cttcgacagc
      241 gacgtggggg agttccgggc ggtgacggag ctggggcggc ctgctgcgga gtactggaac
      301 agccagaagg acatcctgga ggagaagcgg gcagtgccgg acaggatgtg cagacacaac
      361 tacgagctgg gcgggcccat gaccctgcag cgccgagtcc agcctagggt gaatgtttcc
      421 ccctccaaga aggggccctt gcagcaccac aacctgcttg tctgccacgt gacggatttc
      481 tacccaggca gcattcaagt ccgatggttc ctgaatggac aggaggaaac agctggggtc
      541 gtgtccacca acctgatccg taatggagac tggaccttcc agatcctggt gatgctggaa
      601 atgacccccc agcagggaga tgtctacacc tgccaagtgg agcacaccag cctggatagt
      661 cctgtcaccg tggagtggaa ggcacagtct gattctgccc ggagtaagac attgacggga
      721 gctgggggct tcgtgctggg gctcatcatc tgtggagtgg gcatcttcat gcacaggagg
      781 agcaagaaag ttcaacgagg atctgcataa acagggttcc tgagctcact gaaaagacta
      841 ttgtgcctta ggaaaagcat ttgctgtgtt tcgttagcat ctggctccag gacagacctt
      901 caacttccaa attggatact gctgccaaga agttgctctg aagtcagttt ctatcattct
      961 gctctttgat tcaaagcact gtttctctca ctgggcctcc aaccatgttc ccttcttctt
     1021 agcaccacaa ataatcaaaa cccaaaaaaa aaaaaaaaaa
//