LOCUS BC007942 2028 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens synaptonemal complex protein SC65, mRNA (cDNA clone
MGC:14267 IMAGE:4130726), complete cds.
ACCESSION BC007942
VERSION BC007942.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2028)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2028)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007942.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: h Column: 16.
FEATURES Location/Qualifiers
source 1..2028
/db_xref="H-InvDB:HIT000033547"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14267 IMAGE:4130726"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2028
/gene="SC65"
/gene_synonym="NOL55"
/db_xref="GeneID:10609"
CDS 33..1346
/gene="SC65"
/gene_synonym="NOL55"
/codon_start=1
/product="synaptonemal complex protein SC65"
/protein_id="AAH07942.1"
/db_xref="GeneID:10609"
/translation="MARVAWGLLWLLLGSAGAQYEKYSFRGFPPEDLMPLAAAYGHAL
EQYEGESWRESARYLEAALRLHRLLRDSEAFCHANCSGPAPAAKPDPDGGRADEWACE
LRLFGRVLERAACLRRCKRTLPAFQVPYPPRQLLRDFQSRLPYQYLHYALFKANRLEK
AVAAAYTFLQRNPKHELTAKYLNYYQGMLDVADESLTDLEAQPYEAVFLRAVKLYNSG
DFRSSTEDMERALSEYLAVFARCLAGCEGAHEQVDFKDFYPAIADLFAESLQCKVDCE
ANLTPNVGGYFVDKFVATMYHYLQFAYYKLNDVRQAARSAASYMLFDPKDSVMQQNLV
YYRFHRARWGLEEEDFQPREEAMLYHNQTAELRELLEFTHMYLQSDDEMELEETEPPL
EPEDALSDAEFEGEGDYEEGMYADWWQEPDAKGDEAEAEPEPELA"
BASE COUNT 442 a 606 c 647 g 333 t
ORIGIN
1 ctcagctccg gagagccggc ggcgcggcgg gcatggctcg ggtggcgtgg gggctgctgt
61 ggttgctgct gggcagcgcc ggggcgcagt acgagaagta cagcttccgg ggcttcccgc
121 ccgaggacct gatgccgctg gccgcggcgt acgggcacgc tctggagcag tacgagggag
181 agagctggcg cgagagcgcg cgctacctgg aggcggcgct gcggctgcac cggctcctgc
241 gcgacagcga ggccttctgc cacgccaact gcagcggccc cgcgcccgcg gccaagcccg
301 atcccgacgg cggccgcgca gacgagtggg cctgcgagct gcggctcttc ggccgcgtcc
361 tggagcgagc cgcctgcctg cggcgctgca agcggacgct gcccgccttc caggtgccct
421 acccgccgcg gcagctgctg cgtgacttcc agagccgcct gccctaccag tacctgcact
481 acgcgctgtt caaggctaac cggctggaga aggcggtggc ggcggcctac accttcctcc
541 agaggaaccc gaagcacgag ctgaccgcca agtatctcaa ctactatcag gggatgctgg
601 acgtcgccga cgagtccctc acggacctag aggcccagcc ctacgaggcc gtgttcctcc
661 gggctgtgaa gctctacaac agcggggatt tccgcagcag cacggaggac atggagcggg
721 ccttgtcaga gtacctggca gtctttgccc ggtgcctggc cggctgtgaa ggggcccatg
781 agcaggtgga cttcaaggac ttctacccgg ccatagcaga tctctttgca gagtccctgc
841 agtgcaaggt ggactgtgag gccaatttga cccccaatgt gggtggctac ttcgtggaca
901 agttcgtggc caccatgtac cactacctgc agtttgccta ctataagttg aatgatgtgc
961 gccaggctgc ccgcagcgcc gccagctaca tgctcttcga ccccaaggac agcgtcatgc
1021 agcagaacct ggtgtattac cggttccacc gggctcgctg gggcctggaa gaggaggact
1081 tccagccccg ggaggaggcc atgctctacc acaaccagac cgccgagctg cgggagctgc
1141 tggagttcac ccacatgtac ctgcagtcag atgatgagat ggagctggag gagacagaac
1201 cgcccctgga gcctgaggat gccctatctg acgccgagtt tgagggggag ggtgactacg
1261 aggagggcat gtatgctgac tggtggcagg agccggatgc caagggtgac gaggccgagg
1321 ctgagccaga gcctgaactc gcatgagaag gggacacccc acacccctca agcttgggaa
1381 gcctggtgcc gatggcccca ccctcaccag cctgggcagc agcaagaact atttattaaa
1441 aacttaagat gggccaggtg cggtggctca cacctgtaat cccagcattt tgggaggcca
1501 aggtgggtgg atcacttgag gccaggagtt caagaccagc ctggccaaca tgatgagacc
1561 tccgtctcta ctaaaataca taaattagcc gggtgtggtg gcaggcgcct gaaatcccag
1621 ctactcaaga ggctgaggca ggagaatcgc ttgaacctgg gaggcaaagg ttgcagtgaa
1681 ctgagattgc gccaccgcac tccagcctgg gcgacagagc gagactccat ctttaaaaaa
1741 aaacaagacg ggccggcacg gtggctcacg cctgtaatcc cagcactgag aggccgatca
1801 cttgaggtca ggagttcaag accagcctgg ccaacatggt gaaaccccat ctctactaaa
1861 aaatacaaaa attagccagg catggtggca cacacctgta atcgtagctg aggcaggaga
1921 atcgcctgaa cccaggaggc ggagcttgca gtgagccgag atcgtgccac tgcactccag
1981 cctgggcgac agagtgagac tccatctcaa aaaaaaaaaa aaaaaaaa
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