LOCUS BC007939 1375 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens hairy and enhancer of split 6 (Drosophila), mRNA (cDNA
clone MGC:14279 IMAGE:4131881), complete cds.
ACCESSION BC007939
VERSION BC007939.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1375)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1375)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007939.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: h Column: 4.
FEATURES Location/Qualifiers
source 1..1375
/db_xref="H-InvDB:HIT000033546"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14279 IMAGE:4131881"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1375
/gene="HES6"
/db_xref="GeneID:55502"
/db_xref="HGNC:HGNC:18254"
CDS 125..799
/gene="HES6"
/codon_start=1
/product="hairy and enhancer of split 6 (Drosophila)"
/protein_id="AAH07939.1"
/db_xref="GeneID:55502"
/db_xref="HGNC:HGNC:18254"
/translation="MAPPAAPGRDRVGREDEDGWETRGDRKARKPLVEKKRRARINES
LQELRLLLAGAEVQAKLENAEVLELTVRRVQGVLRGRAREREQLQAEASERFAAGYIQ
CMHEVHTFVSTCQAIDATVAAELLNHLLESMPLREGSSFQDLLGDALAGPPRAPGRSG
WPAGGAPGSPIPSPPGPGDDLCSDLEEAPEAELSQAPAEGPDLVPAALGSLTTAQIAR
SVWRPW"
BASE COUNT 240 a 420 c 481 g 234 t
ORIGIN
1 ggagcgcgga cggctgggct gctgctgggc ggccgcgggg cagcggaggg cgccggcact
61 ccggtccccg ccgctccccg tccccgctgc tcctagcccc tgccgcgtcc ccggcggagc
121 gggcatggcg ccacccgcgg cgcctggccg ggaccgtgtg ggccgtgagg atgaggacgg
181 ctgggagacg cgaggggacc gcaaggcccg gaagcccctg gtggagaaga agcggcgcgc
241 gcggatcaac gagagcctgc aggagctgcg gctgctgctg gcgggcgccg aggtgcaggc
301 caagctggag aacgccgaag tgctggagct gacggtgcgg cgggtccagg gtgtgctgcg
361 gggccgggcg cgcgagcgcg agcagctgca ggcggaagcg agcgagcgct tcgctgccgg
421 ctacatccag tgcatgcacg aggtgcacac gttcgtgtcc acgtgccagg ccatcgacgc
481 taccgtcgct gccgagctcc tgaaccatct gctcgagtcc atgccgctgc gtgagggcag
541 cagcttccag gatctgctgg gggacgccct ggcggggcca cctagagccc ctggacggag
601 tggctggcct gcggggggcg ctccgggatc cccaataccc agccccccgg gtcctgggga
661 cgacctgtgc tccgacctgg aggaggcccc tgaggctgaa ctgagtcagg ctcctgctga
721 ggggcccgac ttggtgcccg cagccctggg cagcctgacc acagcccaaa ttgcccggag
781 tgtctggagg ccttggtgac caatgccagc cagagtcctg cgggggtggg cccggccctc
841 cctggatctc ctccctcctc ccaggggttc agatgtggtg gggtagggcc ctggaagtct
901 cccaggtctt ccctccctcc tctgatggat ggcttgcagg gcagcccctg gtaaccagcc
961 cagtcaggcc ccagccccgt ttcttaagaa acttttaggg accctgcagc tctggagtgg
1021 gtggagggag ggagctacgg gcaggaggaa gaattttgta gagctgccag cgctctccca
1081 ggttcaccca cccagccttc accagccctg tgcgggctct gggggcagag gtggcaggaa
1141 tggtgctggg cactagtgtt ccaggcagcc ctgggctaaa caaaagcttg aacttgccac
1201 ttcagcgggg agatgagagg caggtgcact cagctgcact gcccagagct gtgatgctct
1261 gtacatcttg tttgtagcac acttgagttt gtgtattcca ttgacatcaa atgtgacaat
1321 tttactaaat aaagaatttt ggagttagtt acccttgaaa aaaaaaaaaa aaaaa
//