LOCUS BC007936 943 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens growth associated protein 43, mRNA (cDNA clone
MGC:14099 IMAGE:4126520), complete cds.
ACCESSION BC007936
VERSION BC007936.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 943)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 943)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007936.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: f Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 28872807.
FEATURES Location/Qualifiers
source 1..943
/db_xref="H-InvDB:HIT000033544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14099 IMAGE:4126520"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..943
/gene="GAP43"
/gene_synonym="B-50"
/gene_synonym="PP46"
/db_xref="GeneID:2596"
/db_xref="HGNC:HGNC:4140"
/db_xref="MIM:162060"
CDS 44..760
/gene="GAP43"
/gene_synonym="B-50"
/gene_synonym="PP46"
/codon_start=1
/product="growth associated protein 43"
/protein_id="AAH07936.1"
/db_xref="GeneID:2596"
/db_xref="HGNC:HGNC:4140"
/db_xref="MIM:162060"
/translation="MLCCMRRTKQVEKNDDDQKIEQDGIKPEDKAHKAATKIQASFRG
HITRKKLKGEKKDDVQAAEAEANKKDEAPVADGVEKKGEGTTTAEAAPATGSKPDEPG
KAGETPSEEKKGEGDAATEQAAPQAPASSEEKAGSAETESATKASTDNSPSSKAEDAP
AKEEPKQADVPAAVTAAAATTPAAEDAAAKATAQPPTETGESSQAEENIEAVDETKPK
ESARQDEGKEEEPEADQEHA"
BASE COUNT 293 a 255 c 245 g 150 t
ORIGIN
1 ggaaaggaga gaaggcagga agaaggcaag ggacgagaca accatgctgt gctgtatgag
61 aagaaccaaa caggttgaaa aaaatgatga cgaccaaaag attgaacaag atggtatcaa
121 accagaagat aaagctcata aggccgcaac caaaattcag gctagcttcc gtggacacat
181 aacaaggaaa aagctcaaag gagagaagaa ggatgatgtc caagctgctg aggctgaagc
241 taataagaag gatgaagccc ctgttgccga tggggtggag aagaagggag aaggcaccac
301 tactgccgaa gcagccccag ccactggctc caagcctgat gagcccggca aagcaggaga
361 aactccttcc gaggagaaga agggggaggg tgatgctgcc acagagcagg cagcccccca
421 ggctcctgca tcctcagagg agaaggccgg ctcagctgag acagaaagtg ccactaaagc
481 ttccactgat aactcgccgt cctccaaggc tgaagatgcc ccagccaagg aggagcctaa
541 acaagccgat gtgcctgctg ctgtcactgc tgctgctgcc accacccctg ccgcagagga
601 tgctgctgcc aaggcaacag cccagcctcc aacggagact ggggagagca gccaagctga
661 agagaacata gaagctgtag atgaaaccaa acctaaggaa agtgcccggc aggacgaggg
721 taaagaagag gaacctgagg ctgaccaaga acatgcctga actctaagaa atggctttcc
781 acatccccac cctcccctct cctgagcctg tctctcccta ccctcttctc agctccactc
841 tgaagtccct tcctgtcctg ctcacgtctg tgagtctgtc ctttcccacc cactagccct
901 ctttctctct gtgtggcaaa catttaaaaa aaaaaaaaaa aaa
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