LOCUS BC007921 1467 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens Spi-B transcription factor (Spi-1/PU.1 related), mRNA
(cDNA clone MGC:14093 IMAGE:4309499), complete cds.
ACCESSION BC007921
VERSION BC007921.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1467)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1467)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007921.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: p Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 61888835.
FEATURES Location/Qualifiers
source 1..1467
/db_xref="H-InvDB:HIT000033533"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14093 IMAGE:4309499"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1467
/gene="SPIB"
/gene_synonym="SPI-B"
/db_xref="GeneID:6689"
/db_xref="HGNC:HGNC:11242"
/db_xref="MIM:606802"
CDS 5..793
/gene="SPIB"
/gene_synonym="SPI-B"
/codon_start=1
/product="Spi-B transcription factor (Spi-1/PU.1 related)"
/protein_id="AAH07921.1"
/db_xref="GeneID:6689"
/db_xref="HGNC:HGNC:11242"
/db_xref="MIM:606802"
/translation="MLALEAAQLDGPHFSCLYPDGVFYDLDSCKHSSYPDSEGAPDSL
WDWTVAPPVPATPYEAFDPAAAAFSHPQAAQLCYEPPTYSPAGNLELAPSLEAPGPGL
PAYPTENFASQTLVPPAYAPYPSPVLSEEEDLPLDSPALEVSDSESDEALVAGPEGKG
SEAGTRKKLRLYQFLLGLLTRGDMRECVWWVEPGAGVFQFSSKHKELLARRWGQQKGN
RKRMTYQKLARALRNYAKTGEIRKVKRKLTYQFDSALLPAVRRA"
BASE COUNT 278 a 483 c 402 g 304 t
ORIGIN
1 caccatgctc gccctggagg ctgcacagct cgacgggcca cacttcagct gtctgtaccc
61 agatggcgtc ttctatgacc tggacagctg caagcattcc agctaccctg attcagaggg
121 ggctcctgac tccctgtggg actggactgt ggccccacct gtcccagcca ccccctatga
181 agccttcgac ccggcagcag ccgcttttag ccacccccag gctgcccagc tctgctacga
241 accccccacc tacagccctg cagggaacct cgaactggcc cccagcctgg aggccccggg
301 gcctggcctc cccgcatacc ccacggagaa cttcgctagc cagaccctgg ttcccccggc
361 atatgccccg taccccagcc ctgtgctatc agaggaggaa gacttaccgt tggacagccc
421 tgccctggag gtctcggaca gcgagtcgga tgaggccctc gtggctggcc ccgaggggaa
481 gggatccgag gcagggactc gcaagaagct gcgcctgtac cagttcctgc tggggctact
541 gacgcgcggg gacatgcgtg agtgcgtgtg gtgggtggag ccaggcgccg gcgtcttcca
601 gttctcctcc aagcacaagg aactcctggc gcgccgctgg ggccagcaga aggggaaccg
661 caagcgcatg acctaccaga agctggcgcg cgccctccga aactacgcca agaccggcga
721 gatccgcaag gtcaagcgca agctcaccta ccagttcgac agcgcgctgc tgcctgcagt
781 ccgccgggcc tgagcacacc cgaggctccc acctgcggag ccgctggggg acctcacgtc
841 ccagccagga tccccctgga agaaaaaggg cgtccccaca ctctaggtga taggacttac
901 gcatccccac cttttggggt aaggggagtg ctgccctgcc ataatcccca agcccagccc
961 gggcctgtct gggattcccc acttgtgcct ggggtccctc tgggatttct ttgtcatgta
1021 cagactccct gggatcctca tgttttgggt gacaggacct atggaccact atactcgggg
1081 aggcagggta gcagtgcttc cagagtccca agagcttctc tgggattttc ttgtgatatc
1141 tgattcccca gtgaggcctg ggaccttttt aagatcgctg tgtgtctgta aaccctgaat
1201 ctcatctggg gtgggggccc tgctggcaac cctgagccct gtccaaggtt ccctcttgtc
1261 agatctgaga tttcctagtt atgtctgggg ccctctggga gctgttatca tctcagatct
1321 cttcgcccat ctatggctgt gttgtcacat ctgtcccctc atttttgaga tcccccaatt
1381 ctctggaact attctgctgc ccctttttat gtgtctggag ttccccaatc acatctaggg
1441 ctcctccaaa aaaaaaaaaa aaaaaaa
//