LOCUS BC007920 1218 bp mRNA linear HUM 28-SEP-2004 DEFINITION Homo sapiens major histocompatibility complex, class II, DR beta 1, mRNA (cDNA clone MGC:14111 IMAGE:4309837), complete cds. ACCESSION BC007920 VERSION BC007920.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1218) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1218) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Dec 9, 2003 this sequence version replaced BC007920.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Louis Staudt cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: p Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 26665892. FEATURES Location/Qualifiers source 1..1218 /db_xref="H-InvDB:HIT000033532_04" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14111 IMAGE:4309837" /tissue_type="Primary B-Cells from Tonsils" /clone_lib="NIH_MGC_48" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1218 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /db_xref="GeneID:3123" /db_xref="MIM:142857" CDS 47..847 /gene="HLA-DRB1" /gene_synonym="HLA-DR1B" /codon_start=1 /product="HLA-DRB1 protein" /protein_id="AAH07920.1" /db_xref="GeneID:3123" /db_xref="MIM:142857" /translation="MVCLRLPGGSCMAVLTVTLMVLSSPLALAGDTRPRFLEYSTSEC HFFNGTERVRFLDRYFHNQEENVRFDSDVGEFRAVTELGRPDAEYWNSQKDILEDERA AVDTYCRHNYGVGESFTVQRRVHPKVTVYPSKTQPLQHHNLLVCSVSGFYPGSIEVRW FRNGQEEKTGVVSTGLIHNGDWTFQTLVMLETVPRSGEVYTCQVEHPSVTSPLTVEWR ARSESAQSKMLSGVGGFVLGLLFLGAGLFIYFRNQKGHSGLQPRGFLS" BASE COUNT 301 a 312 c 329 g 276 t ORIGIN 1 agacttgcct gctgctctgg cccctggtcc tgtcctgttc tccagcatgg tgtgtctgag 61 gctccctgga ggctcctgca tggcagttct gacagtgaca ctgatggtgc tgagctcccc 121 actggctttg gctggggaca ccagaccacg tttcttggag tactctacgt ctgagtgtca 181 tttcttcaat gggacggagc gggtgcggtt cctggacaga tacttccata accaggagga 241 gaacgtgcgc ttcgacagcg acgtggggga gttccgggcg gtgacggagc tggggcggcc 301 tgatgccgag tactggaaca gccagaagga catcctggaa gacgagcggg ccgcggtgga 361 cacctactgc agacacaact acggggttgg tgagagcttc acagtgcagc ggcgagtcca 421 tcctaaggtg actgtgtatc cttcaaagac ccagcccctg cagcaccaca acctcctggt 481 ctgttctgtg agtggtttct atccaggcag cattgaagtc aggtggttcc ggaatggcca 541 ggaagagaag actggggtgg tgtccacagg cctgatccac aatggagact ggaccttcca 601 gaccctggtg atgctggaaa cagttcctcg gagtggagag gtttacacct gccaagtgga 661 gcacccaagc gtgacaagcc ctctcacagt ggaatggaga gcacggtctg aatctgcaca 721 gagcaagatg ctgagtggag tcgggggctt tgtgctgggc ctgctcttcc ttggggccgg 781 gctgttcatc tacttcagga atcagaaagg acactctgga cttcagccaa gaggattcct 841 gagctgaagt gcagatgaca cattcaaaga agaactttct gccccagctt tgcaggatga 901 aaagctttcc ctcctggctg ttattcttcc acaagagagg gctttctcag gacctggttg 961 ctactggttc agcaactgca gaaaatgtcc tcccttgtgg cttcctcagc tcctgttctt 1021 ggcctgaagc cccacagctt tgatggcagc gcctcatctt caacttttgt gctccccttt 1081 gcctaaaccc tatggcctcc tgtgcatctg tactcaccct gtaccacaaa cacattacat 1141 tattaaatgt ttctcaaaga tggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 1201 aaaaaaaaaa aaaaaaaa //