LOCUS BC007898 2267 bp mRNA linear HUM 11-DEC-2003
DEFINITION Homo sapiens collapsin response mediator protein 1, mRNA (cDNA
clone IMAGE:4130354), partial cds.
ACCESSION BC007898
VERSION BC007898.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2267)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2267)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007898.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: h Column: 19.
FEATURES Location/Qualifiers
source 1..2267
/db_xref="H-InvDB:HIT000033521"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4130354"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2267
/gene="CRMP1"
/gene_synonym="DPYSL1"
/gene_synonym="DRP-1"
/gene_synonym="DRP1"
/db_xref="GeneID:1400"
/db_xref="MIM:602462"
CDS <1..1217
/gene="CRMP1"
/gene_synonym="DPYSL1"
/gene_synonym="DRP-1"
/gene_synonym="DRP1"
/codon_start=3
/product="CRMP1 protein"
/protein_id="AAH07898.2"
/db_xref="GeneID:1400"
/db_xref="MIM:602462"
/translation="AYKDVYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRI
LEMGITGPEGHALSRPEELEAEAVFRAITIAGRINCPVYITKVMSKSAADIIALARKK
GPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQV
TGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERMTVVWDKAVATGKMDENQFVAVTST
NAAKIFNLYPRKGRIAVGSDADVVIWDPDKLKTITAKSHKSAVEYNIFEGMECHGSPL
VVISQGKIVFEDGNINVNKGMGRFIPRKAFPEHLYQRVKIRNKVFGLQGVSRGMYDGP
VYEVPATPKYATPAPSAKSSPSKHQPPPIRNLHQSNFSLSGAQIDDNNPRRTGHRIVA
PPGGRSNITSLG"
misc_feature 471..737
/gene="CRMP1"
/gene_synonym="DPYSL1"
/gene_synonym="DRP-1"
/gene_synonym="DRP1"
/note="Amidohydro_1; Region: Amidohydrolase family. This
family of enzymes are a a large metal dependent hydrolase
superfamily. The family includes Adenine deaminase
EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine
and ammonia. Adenine deaminases reaction is important for
adenine utilisation as a purine and also as a nitrogen
source. This family also includes dihydroorotase and
N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25
These enzymes catalyse the reaction N-acetyl-D-glucosamine
6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate.
This family includes the catalytic domain of urease alpha
subunit"
/db_xref="CDD:pfam01979"
BASE COUNT 557 a 610 c 587 g 513 t
ORIGIN
1 tggcctataa ggatgtctac caaatgtccg acagccagct ctatgaagcc tttaccttcc
61 ttaagggcct gggagctgtg atcttggtcc atgcagaaaa tggagatttg atagctcagg
121 aacaaaagcg gatcctggag atgggcatca cgggtcccga gggccatgcc ctgagcagac
181 ctgaagagct ggaggccgag gcggtgttcc gggccatcac cattgcgggc cggatcaact
241 gccctgtgta catcaccaag gtcatgagca agagtgcagc cgacatcatc gctctggcca
301 ggaagaaagg gcccctagtt tttggagagc ccattgccgc cagcctgggg accgatggca
361 cccattactg gagcaagaac tgggccaagg ctgcggcgtt cgtgacttcc cctcccctga
421 gcccggaccc taccacgccc gactacttga cctccctact ggcctgtggg gacttgcagg
481 tcacaggcag cggccactgt ccctacagca ctgcccagaa ggcggtgggc aaggacaact
541 ttaccctgat ccccgagggt gtcaacggga tagaggagcg gatgacggtc gtctgggaca
601 aggcggtggc tactggcaaa atggatgaga accagtttgt cgctgtcacc agcaccaatg
661 cagccaagat ctttaacctg tacccaagga aagggcggat tgccgtgggc tcggatgccg
721 acgtggtcat ctgggacccc gacaagttga agaccataac agccaaaagt cacaagtcgg
781 cggtggagta caacatcttc gagggtatgg agtgccacgg ctccccacta gtggtcatca
841 gccagggcaa gatcgtcttt gaagacggaa acatcaacgt caacaagggc atgggccgct
901 tcattccgcg gaaggcgttc ccggagcacc tgtaccagcg cgtcaaaatc aggaataagg
961 tttttggatt gcaaggggtt tccaggggca tgtatgacgg tcctgtgtac gaggtaccag
1021 ctacacccaa atatgcaact cccgctcctt cagccaaatc ttcgccttct aaacaccagc
1081 ccccacccat cagaaacctc caccagtcca acttcagctt atcaggtgcc cagatagatg
1141 acaacaatcc caggcgcacc ggccaccgca tcgtggcgcc ccctggtggc cgctccaaca
1201 tcaccagcct cggttgaacg tggatgcgcg gaggagctag cctgaaggat tctgggaatc
1261 atgtccatcc cttttcctgt cagtgttttt gaaacccaca gttttagttg gtgctgatgg
1321 agggaggggg aagtcgaagg atgctctttc ccttttctgt ttaggaagaa gtggtactag
1381 tgtggtgtgt ttgcttggaa attccttgcc ccacagttgt gttcatgctg aatccacctc
1441 ggagcatggt gttttcattc ccccttccta gtgaaccaca ggttttagca ttgtcttgtt
1501 ctgtcccttc cacttctaac tccactggct ccatgattct ctgagtggtg gttcctttgc
1561 accctgtaga tgttctagga tagttgatgc atgttactaa attacgtatg caagtctgtg
1621 agtgcgtctg aggggacatc gccaaggact gactgagaca cgatgccgag acctcaagcc
1681 ctgaggggca gtcccaaaac ccttacagtg aagatgttta ctcattgccc ccacctctgg
1741 tccacactag aaagaagctc gccccacctc cacctgtgag atccgtgaat tctcggaatg
1801 gcaggggaag ccttgcacta ggttgcagag aagcatcctc cacatcctgt gtcagaaacc
1861 ctggtctccg tggcacttgt aactcaccgt gctgtcttct ggtctgtgtg tgttcttcaa
1921 gccagctcta ggcttcaggc cgagccaggt tcacactcag aaagaggtct ccccatcccc
1981 attcggggct gacgatgggg ggctgatggc tgcccctgcg tggcctgagt cctggtccct
2041 ctgaggcagt tgacggggca gtcagatttt taaagttttg tacaaagttt tcctttgtaa
2101 tcactcccat ttttacttaa caaccaactt gttgtggctc ttatttctga attcaaagct
2161 tgtgaaaaaa taaagaaaat gaactgccca ctgacctgac tagggcactt tcaaaaaaaa
2221 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa
//