LOCUS BC007879 1730 bp mRNA linear HUM 18-AUG-2006
DEFINITION Homo sapiens family with sequence similarity 120A, mRNA (cDNA clone
IMAGE:3938062), partial cds.
ACCESSION BC007879
VERSION BC007879.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1730)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1730)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007879.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: b Column: 13.
FEATURES Location/Qualifiers
source 1..1730
/db_xref="H-InvDB:HIT000086940"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3938062"
/tissue_type="Lung, small cell carcinoma"
/clone_lib="NIH_MGC_7"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1730
/gene="FAM120A"
/gene_synonym="DNAPTP1"
/gene_synonym="DNAPTP5"
/db_xref="GeneID:23196"
/db_xref="HGNC:HGNC:13247"
CDS <1..1488
/gene="FAM120A"
/gene_synonym="DNAPTP1"
/gene_synonym="DNAPTP5"
/codon_start=1
/product="FAM120A protein"
/protein_id="AAH07879.2"
/db_xref="GeneID:23196"
/db_xref="HGNC:HGNC:13247"
/translation="VKVAQSIEDHHQEVIGFCRENGFHGLVAYDSDYALCNIPYYFSA
HALKLSRNGKSLTTSQYLMHEVAKQLDLNPNRFPIFAALLGNHILPDEDLASFHWSLL
GPEHPLASLKVRAHQLVLPPCDVVIKAVADYVRNIQDTSDLDAIAKDVFQHSQSRTDD
KVIRFKRAIGYYSATSKPMSFHPPHYLAARPGPFGMPGMVPPHVPPQMLNIPQTSLQA
KPVAPQVPSPGGAPGQGPYPYSLSEPAPLTLDTSGKNLTEQNSYSNIPHEGKHTPLYE
RSSPINPAQSGSPNHVDSAYFPGSSTSSSSDNDEGSGGATNHISGNKIGWEKTGSHSE
PQARGDPGDQTKAEGSSTASSGSQLAEGKGSQMGTVQPIPCLLSMPTRNHMDITTPPL
PPVAPEVLRVAEHRHKKGLMYPYIFHVLTKGEIKIAVSIEDEANKDLPPAALLYRPVR
QYVYGVLFSLAESRKKTERLAFRKNRLPPECMYCNNPLFVFLGTS"
BASE COUNT 479 a 463 c 407 g 381 t
ORIGIN
1 gtcaaggttg cacagagcat tgaggatcac catcaggaag tgattggttt ctgcagagag
61 aatggtttcc atggcttggt tgcgtatgac tctgattatg cactgtgcaa catcccctac
121 tatttcagtg cccatgccct aaaactgagc cggaacggga aaagtctcac cacaagccaa
181 tatctgatgc atgaagttgc caagcaactg gacctgaatc caaatcgttt tcctattttt
241 gctgctctct taggaaatca cattctgcct gatgaagatc tggcttcctt tcattggagt
301 ttacttggtc cagaacatcc actagcctca ctaaaggtcc gggcccacca gctggtcttg
361 ccaccttgcg acgtagtgat caaagccgtt gctgactatg tacgcaacat tcaggacacc
421 tctgacttgg atgccatagc taaagatgtt ttccagcatt cacagtctag aacagatgac
481 aaagttattc gatttaagag agcaattgga tattattcag cgactagtaa gcctatgtca
541 tttcatccac cacattactt agcagccaga cccggtccgt ttggaatgcc tgggatggtg
601 ccgccgcatg ttcctcctca gatgctcaac attccgcaga cctctctgca agcaaagccc
661 gtggccccac aggtgcccag cccagggggc gccccgggcc agggtccata cccgtacagc
721 ctctctgagc cagcacctct cactttggac acgagcggga agaatctgac ggagcagaac
781 agctacagca acattcctca cgaagggaag cacacgccgc tgtatgagcg gtcctcgccc
841 atcaacccgg cccagagcgg cagccccaac cacgtggatt ccgcctactt ccctggctct
901 tctacatcgt catcttccga caacgacgag ggcagcggag gggcgacaaa ccatatcagc
961 gggaacaaga ttggctggga gaagacggga agccactcag agcctcaggc acgaggagac
1021 ccaggagacc aaacaaaggc agaaggctcg tccactgcct cttcaggaag ccaactagcc
1081 gaaggcaagg gaagccagat gggcactgtc cagccaatcc cgtgcctcct gtcgatgccc
1141 accaggaacc acatggacat caccacacct cccctgcccc ccgtcgcacc tgaggtgctg
1201 agagtggccg agcacaggca caagaagggg ctgatgtacc cctacatctt ccatgtcctg
1261 acgaagggtg aaatcaaaat tgctgtttct attgaagatg aagccaacaa ggacctgcct
1321 ccggccgctc tgctctatag gccagttcgt cagtatgttt acggagtcct gtttagtttg
1381 gcagaaagca gaaagaaaac tgagagactt gcttttagaa agaacagact tccaccagaa
1441 tgtatgtact gtaacaatcc attgtttgtt ttcctcggta cctcgtaatc tcttgtgcat
1501 tttctaaagc cttagaagaa tcatgactga gttgaccccg agtgcctctg tgtaaaggag
1561 gtgggcccat catcggggca gtaggccagg gtaaaggctc ttagaaaagg aggagaagcc
1621 acagactttc ttcctcagta acattccaat aatgatgttt attcagtaaa ataataaaac
1681 aggtttacac tttaaagtga aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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