LOCUS BC007863 890 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens platelet-activating factor acetylhydrolase, isoform
Ib, gamma subunit 29kDa, mRNA (cDNA clone MGC:14395 IMAGE:4301185),
complete cds.
ACCESSION BC007863
VERSION BC007863.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 890)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 890)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007863.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: m Column: 20
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 20149519.
FEATURES Location/Qualifiers
source 1..890
/db_xref="H-InvDB:HIT000033499"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14395 IMAGE:4301185"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..890
/gene="PAFAH1B3"
/db_xref="GeneID:5050"
/db_xref="HGNC:HGNC:8576"
/db_xref="MIM:603074"
CDS 134..829
/gene="PAFAH1B3"
/codon_start=1
/product="platelet-activating factor acetylhydrolase,
isoform Ib, gamma subunit 29kDa"
/protein_id="AAH07863.1"
/db_xref="GeneID:5050"
/db_xref="HGNC:HGNC:8576"
/db_xref="MIM:603074"
/translation="MSGEENPASKPTPVQDVQGDGRWMSLHHRFVADSKDKEPEVVFI
GDSLVQLMHQCEIWRELFSPLHALNFGIGGDGTQHVLWRLENGELEHIRPKIVVVWVG
TNNHGHTAEQVTGGIKAIVQLVNERQPQARVVVLGLLPRGQHPNPLREKNRQVNELVR
AALAGHPRAHFLDADPGFVHSDGTISHHDMYDYLHLSRLGYTPVCRALHSLLLRLLAQ
DQGQGAPLLEPAP"
BASE COUNT 186 a 271 c 268 g 165 t
ORIGIN
1 ccgcgggtgt gctagcgttg ggacggtcct ttgttgccgc gaggggtagg agtgggcgtg
61 gcggagccag ctccgttcgg aacactcccg ggccgacccg actcgctcat cctgcaggag
121 ctgcggcgcc aagatgagtg gagaggagaa cccagccagc aagcccacgc cggtgcagga
181 cgtacagggc gacgggcgct ggatgtccct gcaccatcgg ttcgtggctg acagcaaaga
241 taaggaaccc gaagtcgtct tcatcgggga ctccttggtc cagctcatgc accagtgcga
301 gatctggcgc gagctcttct ctcctctgca tgcacttaac tttggcattg gtggtgacgg
361 cacacagcat gtactgtggc ggctggagaa tggggagctg gaacacatcc ggcccaagat
421 tgtggtggtc tgggtgggca ccaacaacca cggacacaca gcagagcagg tgactggtgg
481 catcaaggcc attgtgcaac tggtgaatga gcgacagccc caggcccggg ttgtggtgct
541 gggcctgctt ccgcgaggcc aacatcccaa cccacttcgg gagaagaacc gacaggtgaa
601 cgagctggta cgggcggcac tggctggcca ccctcgggcc cacttcctag atgccgaccc
661 tggctttgtg cactcagatg gcaccatcag ccatcatgac atgtatgatt acctgcatct
721 gagccgcctg ggctacacac ctgtttgccg ggctctgcac tccctgcttc tgcgtctgct
781 ggcccaagac cagggccaag gtgctcccct gctggagccc gcaccctaag catcctgctg
841 ccttcccaca acattaaact ctccttcctc agaaaaaaaa aaaaaaaaaa
//