LOCUS BC007837 2589 bp mRNA linear HUM 27-SEP-2007
DEFINITION Homo sapiens ATPase, class I, type 8B, member 2, mRNA (cDNA clone
IMAGE:4111596), partial cds.
ACCESSION BC007837
VERSION BC007837.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2589)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2589)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007837.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: c Column: 18.
FEATURES Location/Qualifiers
source 1..2589
/db_xref="H-InvDB:HIT000086928"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4111596"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..2589
/gene="ATP8B2"
/gene_synonym="ATPID"
/gene_synonym="DKFZp434M0219"
/db_xref="GeneID:57198"
/db_xref="HGNC:HGNC:13534"
/db_xref="MIM:605867"
CDS <1..2290
/gene="ATP8B2"
/gene_synonym="ATPID"
/gene_synonym="DKFZp434M0219"
/codon_start=2
/product="ATP8B2 protein"
/protein_id="AAH07837.2"
/db_xref="GeneID:57198"
/db_xref="HGNC:HGNC:13534"
/db_xref="MIM:605867"
/translation="ERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGDPHTHEFFRLLS
LCHTVMSEEKNEGELYYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHEMGTAITYQ
LLAILDFNNIRKRMSVIVRNPEGKIRLYCKGADTILLDRLHHSTQELLNTTMDHLNEY
AGEGLRTLVLAYKDLDEEYYEEWAERRLQASLAQDSREDRLASIYEEVENNMMLLGAT
AIEDKLQQGVPETIALLTLANIKIWVLTGDKQETAVNIGYSCKMLTDDMTEVFIVTGH
TVLEVREELRKAREKMMDSSRSVGNGFTYQDKLSSSKLTSVLEAVAGEYALVINGHSL
AHALEADMELEFLETACACKAVICCRVTPLQKAQVVELVKKYKKAVTLAIGDGANDVS
MIKTAHIGVGISGQEGIQAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYK
NFAFTMVHFWFGFFCGFSAQTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEY
PKLYEPGQLNLLFNKREFFICIAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQSFA
VTVATSLVIVVSVQIGLDTGYWTAINHFFIWGSLAVYFAILFAMHSNGLFDMFPNQFR
FVGNAQNTLAQPTVWLTIVLTTVVCIMPVVAFRFLRLNLKPDLSDTVRYTQLVRKKQK
AQHRCMRRVGRTGSRRSGYAFSHQEGFGELIMSGKNMRLSSLALSSFTTRSSSSWIES
LRRKKSDSASSPSGGADKPLKG"
BASE COUNT 570 a 749 c 714 g 556 t
ORIGIN
1 agagagacct gaacctgttg acttctcctt caatcctctg gctgacaaga agttcttatt
61 ttgggacccc agcctgctgg aggctgtcaa gatcggggac ccccacacgc atgagttctt
121 ccgcctcctt tccctgtgtc atactgtcat gtcagaagaa aagaacgaag gagagctgta
181 ctacaaagct cagtccccag atgagggggc cctggtcacc gcagccagga actttggttt
241 tgttttccgc tctcgcaccc ccaaaacaat caccgtccat gagatgggca cagccatcac
301 ctaccagctg ctggccatcc tggacttcaa caacatccgc aagcggatgt cggtcatagt
361 gcggaatcca gaggggaaga tccgactcta ctgcaaaggg gctgacacta tcctactgga
421 cagactgcac cactccactc aagagctgct caacaccacc atggaccacc ttaatgagta
481 cgcaggggaa gggctgagga ccctggtgct ggcctacaag gatctggatg aagagtacta
541 cgaggagtgg gctgagcgac gcctccaggc cagcctggcc caggacagcc gggaggacag
601 gctggctagc atctatgagg aggttgagaa caacatgatg ctgctgggtg caacggccat
661 tgaggacaaa cttcagcaag gggttccaga gaccattgcc ctcctgacac tggccaacat
721 caagatttgg gtgctaaccg gagacaagca agagacggct gtgaacatcg gctattcctg
781 caagatgctg acggatgaca tgactgaggt tttcatagtc actggccata ctgtcctgga
841 ggtgcgggag gagctcagga aagcccggga gaagatgatg gactcatccc gctctgtagg
901 caacggcttc acctatcagg acaagctttc ttcttccaag ctaacttctg tcctggaggc
961 cgttgctggg gagtacgccc tggtcataaa tggtcacagc ctggcccacg cactggaggc
1021 agacatggag ctggagtttc tggagacagc gtgtgcctgc aaagctgtca tctgctgccg
1081 ggtgaccccc ttgcagaagg cacaggtggt agaactggtc aagaagtaca agaaggctgt
1141 gacgcttgcc attggagacg gagccaatga tgtcagcatg atcaaaacgg ctcacattgg
1201 tgtggggatc agtgggcagg aagggatcca ggctgtcttg gcctccgatt actccttctc
1261 ccagttcaag ttcctgcagc gcctcctgct ggtgcatggg cgctggtcct acctgcgaat
1321 gtgcaagttt ctttgctatt tcttctacaa aaactttgct ttcaccatgg tccacttctg
1381 gtttggcttc ttctgtggct tctcagccca gaccgtctat gaccagtatt tcatcaccct
1441 gtataacatc gtgtacacct ccctgccagt cctggctatg ggggtctttg atcaggatgt
1501 ccccgagcag cggagcatgg agtaccctaa gctgtatgag ccgggccagc tgaaccttct
1561 cttcaacaag cgggagttct tcatctgcat cgcccagggc atctacacct ccgtgctcat
1621 gttcttcatt ccctatgggg tgtttgctga tgccacccgg gatgatggca ctcagctggc
1681 tgactaccag tcctttgcag tcactgtggc cacatccttg gtcattgtgg ttagcgtgca
1741 gattgggctc gacacaggct actggacggc catcaaccac ttcttcatct ggggaagcct
1801 tgctgtttac tttgccatcc tctttgccat gcacagcaat gggctcttcg acatgtttcc
1861 caaccagttc cggtttgtgg ggaatgccca gaacaccttg gcccagccca cggtgtggct
1921 gaccattgtg ctcaccacag tcgtctgcat catgcccgtg gttgccttcc gattcctcag
1981 gctcaacctg aagccggatc tctccgacac ggtccgctac acacagctcg tgaggaagaa
2041 gcagaaggcc cagcaccgct gcatgcggcg ggttggccgc actggctccc ggcgctccgg
2101 ctatgccttc tcccatcagg agggcttcgg ggagctcatc atgtctggca agaacatgcg
2161 gctgagctct ctcgcgctct ccagcttcac cacccgctcc agctccagct ggattgagag
2221 cctgcgcagg aagaagagtg acagtgccag tagccccagt ggcggtgccg acaagcccct
2281 caagggctga aggccgagga tggatgccct gtgccagtga ccagagcacc cagggctggc
2341 cagtcactga gggaacagcg tctcggaact gctggtcctc attccttgct tcccgtcccc
2401 ccggtagact ctgtcctgct ggtcccacca cacatggctg ggacatctgt tcccagctgt
2461 aggcccttcc accagctggg gagctagagg gagcaggccc aagggcagag cagaggctga
2521 ggcacgggga gccagcccca ctcggggacc agaagtggaa ccaaaaacaa gaaaaaaaaa
2581 aaaaaaaaa
//