LOCUS BC007829 1576 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens Yip1 domain family, member 5, mRNA (cDNA clone MGC:14147 IMAGE:3632787), complete cds. ACCESSION BC007829 VERSION BC007829.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1576) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1576) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC007829.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 20 Row: a Column: 16 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 68131545. FEATURES Location/Qualifiers source 1..1576 /db_xref="H-InvDB:HIT000033475" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:14147 IMAGE:3632787" /tissue_type="Uterus, endometrium adenocarcinoma" /clone_lib="NIH_MGC_44" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1576 /gene="YIPF5" /gene_synonym="FinGER5" /gene_synonym="SB140" /gene_synonym="SMAP-5" /gene_synonym="SMAP5" /gene_synonym="YIP1A" /db_xref="GeneID:81555" /db_xref="HGNC:HGNC:24877" CDS 109..882 /gene="YIPF5" /gene_synonym="FinGER5" /gene_synonym="SB140" /gene_synonym="SMAP-5" /gene_synonym="SMAP5" /gene_synonym="YIP1A" /codon_start=1 /product="Yip1 domain family, member 5" /protein_id="AAH07829.1" /db_xref="GeneID:81555" /db_xref="HGNC:HGNC:24877" /translation="MSGFENLNTDFYQTSYSIDDQSQQSYDYGGSGGPYSKQYAGYDY SQQGRFVPPDMMQPQQPYTGQIYQPTQAYTPASPQPFYGNNFEDEPPLLEELGINFDH IWQKTLTVLHPLKVADGSIMNETDLAGPMVFCLAFGATLLLAGKIQFGYVYGISAIGC LGMFCLLNLMSMTGVSFGCVASVLGYCLLPMILLSSFAVIFSLQGMVGIILTAGIIGW CSFSASKIFISALAMEGQQLLVAYPCALLYGVFALISVF" BASE COUNT 439 a 321 c 369 g 447 t ORIGIN 1 gtagcaacgg ggctggttca gggtctgaaa cagagtttgg gggttgtttg ggattagtga 61 agctactgcc tttgccgcca gcgcagcctc agagtttgat tatttgcaat gtcaggcttt 121 gaaaacttaa acacggattt ctaccagaca agttacagca tcgatgatca gtcacagcag 181 tcctatgatt atggaggaag tggaggaccc tatagcaaac agtatgctgg ctatgactat 241 tcgcagcaag gcagatttgt ccctccagac atgatgcagc cacaacagcc atacaccggg 301 cagatttacc agccaactca ggcatatact ccagcttcac ctcagccttt ctatggaaac 361 aactttgagg atgagccacc tttattagaa gagttaggta tcaattttga ccacatctgg 421 caaaaaacac taacagtatt acatccgtta aaagtagcag atggcagcat catgaatgaa 481 actgatttgg caggtccaat ggttttttgc cttgcttttg gagccacatt gctactggct 541 ggcaaaatcc agtttggcta tgtatacggg atcagtgcaa ttggatgtct aggaatgttt 601 tgtttattaa acttaatgag tatgacaggt gtttcatttg gttgtgtggc aagtgtcctt 661 ggatattgtc ttctgcccat gatcctactt tccagctttg cagtgatatt ttctttgcaa 721 ggaatggtag gaatcattct cactgctggg attattggat ggtgtagttt ttctgcttcc 781 aaaatattta tttctgcatt agccatggaa ggacagcaac ttttagtagc atatccttgc 841 gctttgttat atggagtctt tgccctgatt tccgtctttt gaaaatttat ctgggatgtg 901 gacatcagtg ggccagatgt acaaaaagga ccttgaactc ttaaattgga ccagcaaact 961 gctgcagcgc aactctcatg cagatttaca tttgactgtt ggagcaatga aagtaaacgt 1021 gtatctcttg ttcattttta tagaactttt gcatactgta ttggatttac ctgcggtgtg 1081 actagcttta aatgtttgtg tttatacaga taagaaatgc tatttctttc tggttcctgc 1141 agccattgaa aaaccttttt ccttgcaaat tataatgttt ttgatagatt tttatcaact 1201 gtgggaaacc aaacacaaag ctgataacct ttcttaaaaa cgacccagtc acagtaaaga 1261 agacacaaga aggccgggcg tggtagctca cgcctgtaat cccagcactt tgggaggccg 1321 aggcgggcgg atcacaaggg caggagatcg agaccatcct ggttaacacg gtgaaacccc 1381 gactctacta aaactacaaa aaaaattagc tgggcgtggt ggcgggcgcc tgtagtccca 1441 gctactcagg aggctgaggc aggagaaaag tgtgaaccca ggaggcggag cttgcagtga 1501 gccgagatca caccactgca ctccatccag cctgggtgac agggtgagac tctgtctcaa 1561 aaaaaaaaaa aaaaaa //