LOCUS BC007802 2416 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6, mRNA
(cDNA clone MGC:14252 IMAGE:4128833), complete cds.
ACCESSION BC007802
VERSION BC007802.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2416)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2416)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007802.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: g Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..2416
/db_xref="H-InvDB:HIT000033457"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14252 IMAGE:4128833"
/tissue_type="Brain, neuroblastoma"
/clone_lib="NIH_MGC_19"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2416
/gene="ST6GALNAC6"
/gene_synonym="RP11-203J24.3"
/gene_synonym="ST6GALNACVI"
/db_xref="GeneID:30815"
/db_xref="HGNC:HGNC:23364"
/db_xref="MIM:610135"
CDS 120..1121
/gene="ST6GALNAC6"
/gene_synonym="RP11-203J24.3"
/gene_synonym="ST6GALNACVI"
/codon_start=1
/product="ST6
(alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,
3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6"
/protein_id="AAH07802.1"
/db_xref="GeneID:30815"
/db_xref="HGNC:HGNC:23364"
/db_xref="MIM:610135"
/translation="MACSRPPSQCEPTSLPPGPPAGRRHLPLSRRRREMSSNKEQRSA
VFVILFALITILILYSSNSANEVFHYGSLRGRSRRPVNLKKWSITDGYVPILGNKTLP
SRCHQCVIVSSSSHLLGTKLGPEIERAECTIRMNDAPTTGYSADVGNKTTYRVVAHSS
VFRVLRRPQEFVNRTPETVFIFWGPPSKMQKPQGSLVRVIQRAGLVFPNMEAYAVSPG
RMRQFDDLFRGETGKDREKSHSWLSTGWFTMVIAVELCDHVHVYGMVPPNYCSQRPRL
QRMPYHYYEPKGPDECVTYIQNEHSRKGNHHRFITEKRVFSSWAQLYGITFSHPSWT"
BASE COUNT 471 a 719 c 720 g 506 t
ORIGIN
1 ggcctgagga gcgcggaccc cggcgctcgg ctcccggcgc catgtgaggg ggctcggggg
61 ccgcgggggg ccgggcgctc cccgccggag atgaggaaac tgaggctcag agaggtcaca
121 tggcttgctc gaggcccccc agccagtgtg aacccacatc cctgccccca gggccacctg
181 caggacgccg acacctaccc ctcagcagac gccggagaga aatgagtagc aacaaagagc
241 agcggtcagc agtgttcgtg atcctctttg ccctcatcac catcctcatc ctctacagct
301 ccaacagtgc caatgaggtc ttccattacg gctccctgcg gggccgtagc cgccgacctg
361 tcaacctcaa gaagtggagc atcactgacg gctatgtccc cattctcggc aacaagacac
421 tgccctctcg gtgccaccag tgtgtgattg tcagcagctc cagccacctg ctgggcacca
481 agctgggccc tgagatcgag cgggctgagt gtacaatccg catgaatgat gcacccacca
541 ctggctactc agctgatgtg ggcaacaaga ccacctaccg cgtcgtggcc cattccagtg
601 tgttccgcgt gctgaggagg ccccaggagt ttgtcaaccg gacccctgaa accgtgttca
661 tcttctgggg gcccccgagc aagatgcaga agccccaggg cagcctcgtg cgtgtgatcc
721 agcgagcggg cctggtgttc cccaacatgg aagcatatgc cgtctctccc ggccgcatgc
781 ggcaatttga cgacctcttc cggggtgaga cgggcaagga cagggagaag tctcattcgt
841 ggttgagcac aggctggttt accatggtga tcgcggtgga gttgtgtgac cacgtgcatg
901 tctatggcat ggtccccccc aactactgca gccagcggcc ccgcctccag cgcatgccct
961 accactacta cgagcccaag gggccggacg aatgtgtcac ctacatccag aatgagcaca
1021 gtcgcaaggg caaccaccac cgcttcatca ccgagaaaag ggtcttctca tcgtgggccc
1081 agctgtatgg catcaccttc tcccacccct cctggaccta ggccacccag cctgtgggac
1141 ctcaggaggg tcagaggaga agcagcctcc gcccagccgc taggccaggg accatcttct
1201 ggccaatcaa ggcttgctgg agtgtctccc agccaatcag ggccttgagg aggatgtatc
1261 ctccagccaa tcagggcctg gggaatctgt tggcgaatca gggatttggg agtctatgtg
1321 gttaatcagg ggtgtctttc ttgtgcagtc agggtctgcg cacagtcaat cagggtagag
1381 ggggtatttc tgagtcaatc tgaggctaag gacatgtcct ttcccatgag gccttggttc
1441 agagccccag gaatggaccc cccaatcact ccccactctg ctgggataat ggggtcctgt
1501 cccaaggagc tgggaacttg gtgttgcccc ctcaatttcc agcaccagaa agagagattg
1561 tgtgggggta gaagctgtct ggaggcccgg ccagagaatt tgtggggttg tggaggttgt
1621 gggggcggtg gggaggtccc agaggtggga ggctggcatc caggtcttgg ctctgccctg
1681 agaccttgga caaacccttc cccctctctg ggcacccttc tgcccacacc agtttccagt
1741 gcggagtctg agaccctttc cacctcccct acaagtgccc tcgggtctgt cctccccgtc
1801 tggaccctcc cagccactat cccttgctgg aaggctcagc tctttggggg gtctggggtg
1861 acctccccac ctcctggaaa actttagggt atttttgcgc aaactccttc agggttgggg
1921 gactctgaag gaaacgggac aaaaccttaa gctgttttct tagcccctca gccagctgcc
1981 attagcttgg ctcttaaagg gccaggcctc cttttctgcc ctctagcagg gaggttttcc
2041 aactgttgga ggcgcctttg gggctgcccc tttgtctgga gtcactgggg gcttccgagg
2101 gtctccctcg accctctgtc gtcctgggat ggctgtcggg agctgtatca cctgggttct
2161 gtcccctggc tctgtatcag gcactttatt aaagctgggc ctcagtgggg tgtgtttgtc
2221 tcctgctctt ctggagcctg gaaggaaagg gcttcaggag gaggctgtga ggctggaggg
2281 accagatgga ggaggccagc agctagccat tgcacactgg ggtgatgggt gggggcggtg
2341 actgccccag acttggtttt gtaatgattt gtacaggaat aaacacacct acgctccgaa
2401 aaaaaaaaaa aaaaaa
//