LOCUS BC007791 947 bp mRNA linear HUM 11-SEP-2007
DEFINITION Homo sapiens splicing factor, arginine/serine-rich 18, mRNA (cDNA
clone IMAGE:3638585), partial cds.
ACCESSION BC007791
VERSION BC007791.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 947)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 947)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007791.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: a Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 18699723.
FEATURES Location/Qualifiers
source 1..947
/db_xref="H-InvDB:HIT000086917"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3638585"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..>947
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
CDS 176..>947
/gene="SFRS18"
/gene_synonym="bA98I9.2"
/gene_synonym="DKFZp564B0769"
/gene_synonym="HSPC306"
/gene_synonym="RP11-98I9.2"
/gene_synonym="SRrp130"
/codon_start=1
/product="SFRS18 protein"
/protein_id="AAH07791.1"
/db_xref="GeneID:25957"
/db_xref="HGNC:HGNC:21222"
/translation="MWDQGGQPWQQWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQ
REASGQQSMVEQPPGMMPNGQDMSTMESGPNNHGNFQGDSNFNRMWQPEWGMHQQPPH
PPPDQPWMPPTPGPMDIVPPSEDSNSQDSGEFAPDNRHIFNQNNHNFGGPPDNFAVGP
VNQFDYQHGAAFGPPQGGFHPPYWQPGPPGPPAPPQNRRERPSSFRDRQRSPIALPVK
QEPPQIDAVKRRTLPAWIREGLEKMEREKQKKLEKKKKK"
BASE COUNT 302 a 227 c 228 g 190 t
ORIGIN
1 aagcatcgaa agcgttggag aggtgttacc ggaacggcgg cgacaagggt gttcccgaac
61 tagagtgggg catacataat cttgctgcta tgcttcgaag ctgtagtctg aatcaaccta
121 agttttaaac agaaggtgaa cctctgagaa aatcaagtat attttaaaag aagggatgtg
181 ggatcaagga ggacagcctt ggcagcagtg gcccttgaac cagcaacaat ggatgcagtc
241 attccagcac caacaggatc caagccagat tgattgggct gcattggccc aagcttggat
301 tgcccaaaga gaagcttcag gacagcaaag catggtagaa caaccaccag gaatgatgcc
361 aaatggacaa gatatgtcta caatggaatc tggtccaaac aatcatggga atttccaagg
421 ggattcaaac ttcaacagaa tgtggcaacc agaatgggga atgcatcagc aacccccaca
481 cccccctcca gatcagccat ggatgccacc aacaccaggc ccaatggaca ttgttcctcc
541 ttctgaagac agcaacagtc aggacagtgg ggaatttgcc cctgacaaca ggcatatatt
601 taaccagaac aatcacaact ttggtggacc acccgataat tttgcagtgg ggccagtgaa
661 ccagtttgac tatcagcatg gggctgcttt tggtccaccg caaggtggat ttcatcctcc
721 ttattggcaa ccaggacctc caggacctcc agcacctccc cagaatcgaa gagaaaggcc
781 atcatcattc agggatcgtc agcgttcacc tattgcactt cctgtgaagc aggagcctcc
841 acaaattgac gcagtaaaac gcaggactct tcccgcttgg attcgcgaag gtcttgaaaa
901 aatggaacgt gaaaagcaga agaaattgga aaaaaaaaaa aaaaaaa
//