LOCUS BC007789 1744 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens placental growth factor, mRNA (cDNA clone MGC:14095
IMAGE:3629125), complete cds.
ACCESSION BC007789
VERSION BC007789.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1744)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1744)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 20, 2003 this sequence version replaced BC007789.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 20 Row: a Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676307.
FEATURES Location/Qualifiers
source 1..1744
/db_xref="H-InvDB:HIT000033448"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:14095 IMAGE:3629125"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1744
/gene="PGF"
/gene_synonym="D12S1900"
/gene_synonym="PLGF"
/gene_synonym="PlGF-2"
/gene_synonym="SHGC-10760"
/db_xref="GeneID:5228"
/db_xref="HGNC:HGNC:8893"
/db_xref="MIM:601121"
CDS 325..837
/gene="PGF"
/gene_synonym="D12S1900"
/gene_synonym="PLGF"
/gene_synonym="PlGF-2"
/gene_synonym="SHGC-10760"
/codon_start=1
/product="placental growth factor"
/protein_id="AAH07789.1"
/db_xref="GeneID:5228"
/db_xref="HGNC:HGNC:8893"
/db_xref="MIM:601121"
/translation="MPVMRLFPCFLQLLAGLALPAVPPQQWALSAGNGSSEVEVVPFQ
EVWGRSYCRALERLVDVVSEYPSEVEHMFSPSCVSLLRCTGCCGDENLHCVPVETANV
TMQLLKIRSGDRPSYVELTFSQHVRCECRPLREKMKPERRRPKGRGKRRREKQRPTDC
HLCGDAVPRR"
BASE COUNT 352 a 540 c 539 g 313 t
ORIGIN
1 catcgacgga cggccgccca gctacgggag gacctggagt ggcactgggc gcccgacgga
61 ccatccccgg gacccgcctg cccctcggcg ccccaccccg ccgggccgct ccccgtcggg
121 ttccccagcc acagccttac ctacgggctc ctgactccgc aaggcttcca gaagatgctc
181 gaaccaccgg ccggggcctc ggggcagcag tgagggaggc gtccagcccc ccactcagct
241 cttctcctcc tgtgccaggg gctccccggg ggatgagcat ggtggttttc cctcggagcc
301 ccctggctcg ggacgtctga gaagatgccg gtcatgaggc tgttcccttg cttcctgcag
361 ctcctggccg ggctggcgct gcctgctgtg cccccccagc agtgggcctt gtctgctggg
421 aacggctcgt cagaggtgga agtggtaccc ttccaggaag tgtggggccg cagctactgc
481 cgggcgctgg agaggctggt ggacgtcgtg tccgagtacc ccagcgaggt ggagcacatg
541 ttcagcccat cctgtgtctc cctgctgcgc tgcaccggct gctgcggcga tgagaatctg
601 cactgtgtgc cggtggagac ggccaatgtc accatgcagc tcctaaagat ccgttctggg
661 gaccggccct cctacgtgga gctgacgttc tctcagcacg ttcgctgcga atgccggcct
721 ctgcgggaga agatgaagcc ggaaaggagg agacccaagg gcagggggaa gaggaggaga
781 gagaagcaga gacccacaga ctgccacctg tgcggcgatg ctgttccccg gaggtaaccc
841 accccttgga ggagagagac cccgcacccg gctcgtgtat ttattaccgt cacactcttc
901 agtggctcct gctggtacct gccctctatt tattagccaa ctgtttccct gctgaatgcc
961 tcgctccctt caagacgagg ggcagggaag gacaggaccc tcaggaattc agtgccttca
1021 acaacgtgag agaaagagag aagccagcca cagacccctg ggagcttccg ctttgaaaga
1081 agcaagacac gtggcctcgt gaggggcaag ctaggcccca gaggccctgg aggtctccag
1141 gggcctgcag aaggaaagaa gggggccctg ctacctgttc ttgggcctca ggctctgcac
1201 agtcaagcag cccttgcttt cggagctcct gtccaaaagt agggatgcgg atcctgctgg
1261 ggccgccacg gcctggctgg tgggaaggcc ggcagcgggc ggaggggatc cagccacttc
1321 cccctcttct tctgaagatc agaacattca gctctggaga acagtggttg cctgggggct
1381 tttgccactc cttgtccccc gtgatctccc ctcacacttt gccatttgct tgtactggga
1441 cattgttctt tccggccaag gtgccaccac cctgcccccc ctaagagaca catacagagt
1501 gggccccggg ctggagaaag agctgcctgg atgagaaaca gctcagccag tggggatgag
1561 gtcaccaggg gaggagcctg tgcgtcccag ctgaaggcag tggcagggga gcaggttccc
1621 caagggccct ggcaccccca caagctgtcc ctgcagggcc atctgactgc caagccagat
1681 tctcttgaat aaagtattct agtgtggaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1741 aaaa
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