LOCUS BC007783 775 bp mRNA linear HUM 19-JUN-2006
DEFINITION Homo sapiens chemokine (C-C motif) ligand 3-like 3, mRNA (cDNA
clone MGC:12815 IMAGE:4308472), complete cds.
ACCESSION BC007783
VERSION BC007783.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 775)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 775)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007783.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis Staudt
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: p Column: 14
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 48949908.
FEATURES Location/Qualifiers
source 1..775
/db_xref="H-InvDB:HIT000033446_04"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12815 IMAGE:4308472"
/tissue_type="Primary B-Cells from Tonsils"
/clone_lib="NIH_MGC_48"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..775
/gene="CCL3L3"
/gene_synonym="464.2"
/gene_synonym="D17S1718"
/gene_synonym="LD78"
/gene_synonym="LD78BETA"
/gene_synonym="MGC12815"
/gene_synonym="SCYA3L"
/gene_synonym="SCYA3L1"
/db_xref="GeneID:414062"
/db_xref="HGNC:HGNC:30554"
/db_xref="MIM:609468"
CDS 71..352
/gene="CCL3L3"
/gene_synonym="464.2"
/gene_synonym="D17S1718"
/gene_synonym="LD78"
/gene_synonym="LD78BETA"
/gene_synonym="MGC12815"
/gene_synonym="SCYA3L"
/gene_synonym="SCYA3L1"
/codon_start=1
/product="chemokine (C-C motif) ligand 3-like 3"
/protein_id="AAH07783.1"
/db_xref="GeneID:414062"
/db_xref="HGNC:HGNC:30554"
/db_xref="MIM:609468"
/translation="MQVSTAALAVLLCTMALCNQVLSAPLAADTPTACCFSYTSRQIP
QNFIADYFETSSQCSKPSVIFLTKRGRQVCADPSEEWVQKYVSDLEPSA"
BASE COUNT 171 a 217 c 183 g 204 t
ORIGIN
1 gcaaagagta gtcagtccct tcttggctct gctgacactc gagcccacat tccatcacct
61 gctcccaatc atgcaggtct ccactgctgc ccttgccgtc ctcctctgca ccatggctct
121 ctgcaaccag gtcctctctg caccacttgc tgctgacacg ccgaccgcct gctgcttcag
181 ctacacctcc cggcagattc cacagaattt catagctgac tactttgaga cgagcagcca
241 gtgctccaag cccagtgtca tcttcctaac caagagaggc cggcaggtct gtgctgaccc
301 cagtgaggag tgggtccaga aatacgtcag tgacctggag ccgagtgcct gaggggtcca
361 gaagcttcga ggcccagcga cctcagtggg cccagtgggg aggagcagga gcctgagcct
421 tgggaacatg cgtgtgacct ccacagctac ctcttctatg gactggttat tgccaaacag
481 ccacactgtg ggactcttct taacttaaat tttaatttat ttatactatt tagtttttat
541 aatttatttt tgatttcaca gtgtgtttgt gattgtttgc tctgagagtt ccccctgtcc
601 cctccacctt ccctcacagt gtgtctggtg acaaccgagt ggctgtcatc ggcctgtgta
661 ggcagtcatg gcaccaaagc caccagactg acaaatgtgt atcagatgct tttgttcagg
721 gctgtgatcg gcctggggaa ataataaaga tgttctttta aacggtaaaa aaaaa
//