LOCUS BC007767 2162 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens G patch domain containing 3, mRNA (cDNA clone
MGC:13149 IMAGE:4298740), complete cds.
ACCESSION BC007767
VERSION BC007767.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2162)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2162)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007767.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: l Column: 2.
FEATURES Location/Qualifiers
source 1..2162
/db_xref="H-InvDB:HIT000033433"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13149 IMAGE:4298740"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2162
/gene="GPATC3"
/gene_synonym="FLJ12455"
/db_xref="GeneID:63906"
/db_xref="HGNC:HGNC:25720"
CDS 6..1583
/gene="GPATC3"
/gene_synonym="FLJ12455"
/codon_start=1
/product="G patch domain containing 3"
/protein_id="AAH07767.1"
/db_xref="GeneID:63906"
/db_xref="HGNC:HGNC:25720"
/translation="MAVPGEAEEEATVYLVVSGIPSVLRSAHLRSYFSQFREERGGGF
LCFHYRHRPERAPPQAAPNSALIPTDPAAEGQLLSQTSATDVRPLSTRDSTPIQTRTC
CCVISVRGLAQAQRLIRMYSGRRWLDSHGTWLPGRCLIRRLRLPTEASGLGSFPFKTR
KELQSWKAENEAFTLADLKQLPELNPPVLMPRGNVGTPLRVFLELIRACRLPPRIITQ
LQLQFPKTGSSRRYGNVPFEYEDSETVEQEELVYTAEGEEIPQGTYLADIPASPCGEP
EEEVGKEEEEESHSDEDDDRGEEWERHEALHEDVTGQERTTEQLFEEEIELKWEKGGS
GLVFYTDAQFWQEEEGDFDEQTADDWDVDMSVYYDRDGGDKDARDSVQMRLEQRLRDG
QEDGSVIERQVGTFERHTKGIGRKVMERQGWAEGQGLGCRCSGVPEALDSDGQHPRCK
RGLGYHGEKLQPFGQLKRPRRNGLGLISTIYDEPLPQDQTESLLRRQPPTSMKFRTDM
AFVRGSSCASDSPSLPD"
BASE COUNT 500 a 570 c 661 g 431 t
ORIGIN
1 ccaagatggc ggtgcccggc gaggcggagg aggaggcgac agtttacctg gtagtgagcg
61 gtatcccctc cgtgttgcgc tcggcccatt tacggagcta ttttagccag ttccgagaag
121 agcgcggcgg tggcttcctc tgtttccact accggcatcg gcctgagcgg gcccctccgc
181 aggccgctcc taactctgcc ctaattccta ccgacccagc cgctgagggc cagcttctct
241 ctcagacttc ggccaccgat gtccggcctc tctccactcg agactctact ccaatccaga
301 cccgcacctg ctgctgcgtc atctcggtaa gggggttggc tcaagctcag aggcttattc
361 gcatgtactc gggccgccgg tggctggatt ctcacgggac ttggctaccg ggtcgctgtc
421 tcatccgcag acttcggcta cctacggagg catcaggtct gggctccttt cccttcaaga
481 cccggaagga actgcagagt tggaaggcag agaatgaagc cttcaccctg gctgacctga
541 agcaactgcc ggagctgaac ccaccagtgc tgatgcccag agggaatgtg gggactcccc
601 tgcgggtctt tttggagttg atccgggcct gccgcctacc ccctcggatc atcacccagc
661 tgcagctcca gttccccaag acaggttcct cccggcgcta cggcaatgtg ccttttgagt
721 atgaggactc agagactgtg gagcaggaag agcttgtgta tacagcagag ggtgaagaaa
781 taccccaagg aacctacctg gcagatatac cagccagccc ctgtggagag cctgaggaag
841 aagtggggaa ggaagaggaa gaagagtctc actcagatga ggacgatgac cggggtgagg
901 aatgggaacg gcatgaagcg ctgcatgagg acgtgaccgg gcaggagcgg accactgagc
961 agctctttga ggaggagatt gagctcaagt gggagaaggg tggctctggc ctggtgtttt
1021 atactgatgc ccagttctgg caggaggaag aaggagattt tgatgaacag acagccgatg
1081 actgggatgt ggacatgagt gtgtactatg acagagatgg tggagacaag gatgcccgag
1141 actctgtcca aatgcgtctg gaacagagac tccgagatgg acaggaagat ggctctgtga
1201 tcgaacgcca ggtgggcacc tttgagcgcc acaccaaggg cattgggcgg aaggtgatgg
1261 agcggcaggg ctgggctgag ggccagggcc tgggctgcag gtgctcaggg gtgcctgagg
1321 ccctggatag tgatggccaa caccccagat gcaagcgtgg attggggtac catggagaga
1381 agctacagcc atttgggcaa ctgaagaggc cccgtagaaa tggcttgggg ctcatctcca
1441 ccatctatga tgagcctcta ccccaagacc agacggagtc actgctccgc cgccagccac
1501 ccaccagcat gaagtttcgg acagacatgg cctttgtgag gggttccagt tgtgcttcag
1561 acagcccctc attgcctgac tgaccgggtt gggggcttcc tttcatagct acatgatgaa
1621 aaccctctgc cctggcctca tctaccactg aagcagaaag gagtctggga gcagcagtct
1681 tcgtggctgg ttcagggtgt tttgttccga gcctgcctgc ctgccggttc tatacctcag
1741 gggcattttt acaaaaagcc ccctcccgtc ccctcccctt ggatattagg ggtaacgacc
1801 gcttgtcttt ggtctctaac cctaatctct gggcttgccc tttgcctcct gcagaacttt
1861 gaaaagctgg gttgagtgag gctatcagca cagccttcct tggggactct gaaggtgtcc
1921 ccacgaaggc cagaaagggg gaaagggacc tgggcgagga gaggatttgt ggtgcttgga
1981 agagccggcc ttgggtgggc cctccaccgc ctctaccctc actgggtggg actgccagcg
2041 gagagtccgc gggaggtggc ttgggtgtgc gacgtcacgg aagaataaag acgtttacta
2101 ctgaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2161 aa
//