LOCUS BC007757 1651 bp mRNA linear HUM 06-JUN-2005 DEFINITION Homo sapiens PRP38 pre-mRNA processing factor 38 (yeast) domain containing B, mRNA (cDNA clone IMAGE:4122389), partial cds. ACCESSION BC007757 VERSION BC007757.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1651) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1651) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 19, 2003 this sequence version replaced BC007757.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 17 Row: f Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 8922357. FEATURES Location/Qualifiers source 1..1651 /db_xref="H-InvDB:HIT000086909" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:4122389" /tissue_type="Muscle, rhabdomyosarcoma" /clone_lib="NIH_MGC_17" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..>1651 /gene="PRPF38B" /gene_synonym="FLJ10330" /db_xref="GeneID:55119" CDS 257..>1651 /gene="PRPF38B" /gene_synonym="FLJ10330" /codon_start=1 /product="PRPF38B protein" /protein_id="AAH07757.1" /db_xref="GeneID:55119" /translation="MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGATKPAVSGKQG NVLPLWGNEKTMNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKG SRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRAL GFMYIRYTQPPTDLWDWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLF PRIPVPVQKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRS RSRSHHREGHGSSSFDRELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRE RHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQ RSRGEVEEKKHKEDKDDRRHRDDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRS RSKEKSSKHKKKKKK" BASE COUNT 528 a 355 c 473 g 295 t ORIGIN 1 aagagatcga gctccctggc tgccggctcg ccttctgcgt ggagttctcg cggtctgggt 61 ttcgctgtct gctcttggcc cggggtcatt ttgtcggcgt cgggtgccct ctcttgccca 121 gctggggcac agcgaggcgg ccccttctcc cgacgacgtt cgatggagta gggtcccaga 181 ccgttgtccc gaagagcgag atcgagcttg gccccctccc ccccctcctt ccctccctcc 241 ttccttccgc cgcaacatgg ctaacaacag ccccgcgctg acaggcaact cgcagccgca 301 gcaccaggcg gctgcagctg cggctcagca acagcagcag tgcggcggcg gcggcgctac 361 caagccggcg gtctccggca agcagggcaa tgtgctcccg ctctggggca acgagaagac 421 catgaacctc aaccccatga tcctgaccaa catcctgtcg tcgccttact tcaaagtaca 481 gctctacgag ctcaagacct accacgaggt ggtggacgag atctacttta aggtcacgca 541 cgttgaacca tgggagaaag gaagcaggaa aacagcgggc cagacaggga tgtgcggagg 601 ggttcgaggt gttggaacag gaggaattgt ttctacagca ttttgcctgt tatacaaatt 661 atttaccctg aagttaactc gaaagcaagt gatgggtctt ataacacaca cagactctcc 721 atatattaga gcgcttggat ttatgtatat aagatataca cagcccccta cagatctgtg 781 ggactggttt gaatccttcc ttgatgatga agaggaccta gatgtgaagg ctggtggagg 841 ctgtgtaatg accattggag aaatgctacg atcttttctc acaaaactgg agtggttttc 901 taccttgttt ccaagaattc cagttccagt tcaaaagaat attgatcaac agattaaaac 961 ccgacctaga aaaatcaaga aagatgggaa ggaaggtgct gaggaaatag acagacatgt 1021 tgaacgcaga cgttcaaggt ctccaaggag atctctgagt ccacggaggt ccccaagaag 1081 gtcaagaagt agaagtcatc atcgggaggg ccatgggtct tctagttttg acagagaatt 1141 agaaagagag aaagaacgcc agcgactaga gcgtgaagcc aaagaaaggg agaaagaacg 1201 gcgaagatcc cgaagtattg accgggggtt agaacgcagg cgcagcagaa gtagggaaag 1261 gcatagaagt cgcagtcgaa gtcgtgatag gaaaggggat agaagggaca gggatcgaga 1321 aagagagaaa gaaaatgaga gaggtagaag acgagatcgt gactatgata aggaaagagg 1381 aaatgaacga gaaaaagaga gagagcgatc aagagaaagg tccaaggaac agagaagtag 1441 gggagaggta gaagagaaga aacataaaga agacaaagat gataggcggc acagagatga 1501 caaaagagat tccaagaaag agaaaaaaca cagtagaagc agaagcagag aaaggaaaca 1561 cagaagtagg agtcgaagta gaaatgcagg gaaacgaagt agaagtagaa gcaaagagaa 1621 atcaagtaaa cataaaaaaa aaaaaaaaaa a //