LOCUS BC007754 3093 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens suppressor of variegation 3-9 homolog 2 (Drosophila),
mRNA (cDNA clone MGC:13305 IMAGE:4109807), complete cds.
ACCESSION BC007754
VERSION BC007754.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3093)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3093)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007754.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: d Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34147611.
FEATURES Location/Qualifiers
source 1..3093
/db_xref="H-InvDB:HIT000033422"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:13305 IMAGE:4109807"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3093
/gene="SUV39H2"
/gene_synonym="FLJ23414"
/db_xref="GeneID:79723"
/db_xref="HGNC:HGNC:17287"
/db_xref="MIM:606503"
CDS 232..1284
/gene="SUV39H2"
/gene_synonym="FLJ23414"
/codon_start=1
/product="suppressor of variegation 3-9 homolog 2
(Drosophila)"
/protein_id="AAH07754.1"
/db_xref="GeneID:79723"
/db_xref="HGNC:HGNC:17287"
/db_xref="MIM:606503"
/translation="MEYYLVKWKGWPDSTNTWEPLQNLKCPLLLQQFSNDKHNYLSQV
KKGKAITPKDNNKTLKPAIAEYIVKKAKQRIALQRWQDELNRRKNHKGMIFVENTVDL
EGPPSDFYYINEYKPAPGISLVNEATFGCSCTDCFFQKCCPAEAGVLLAYNKNQQIKI
PPGTPIYECNSRCQCGPDCPNRIVQKGTQYSLCIFRTSNGRGWGVKTLVKIKRMSFVM
EYVGEVITSEEAERRGQFYDNKGITYLFDLDYESDEFTVDAARYGNVSHFVNHSCDPN
LQVFNVFIDNLDTRLPRIALFSTRTINAGEELTFDYQMKGSGDISSDSIDHSPAKKRV
RTVCKCGAVTCRGYLN"
BASE COUNT 937 a 616 c 654 g 886 t
ORIGIN
1 cggggccgag gcgcgaggag gtgaggctgg agcgcggccc cctcgccttc cctgttccca
61 ggcaagctcc caaggcccgg gcggcggggc cgtcccgcgg gccagccaga tggcgacgtg
121 gcggttcccc gcccgccgcg accccaactc cgggacgcac gctgcggacg cctatcctcc
181 cccaggccgc tgacccgcct ccctgcccgg ccggctcccg ccgcggagga tatggaatat
241 tatcttgtaa aatggaaagg atggccagat tctacaaata cttgggaacc tttgcaaaat
301 ctgaagtgcc cgttactgct tcagcaattc tctaatgaca agcataatta tttatctcag
361 gtaaagaaag gcaaagcaat aactccaaaa gacaataaca aaactttgaa acctgccatt
421 gctgagtaca ttgtgaagaa ggctaaacaa aggatagctc tgcagagatg gcaagatgaa
481 ctcaacagaa gaaagaatca taaaggaatg atatttgttg aaaatactgt tgatttagag
541 ggcccacctt cagacttcta ttacattaac gaatacaaac cagctcctgg aatcagctta
601 gtcaatgaag ctacctttgg ttgttcatgc acagattgct tctttcaaaa atgttgtcct
661 gctgaagctg gagttctttt ggcttataat aaaaaccaac aaattaaaat cccacctggt
721 actcccatct atgaatgcaa ctcaaggtgt cagtgtggtc ctgattgtcc caataggatt
781 gtacaaaaag gcacacagta ttcgctttgc atctttcgaa ctagcaatgg acgtggctgg
841 ggtgtaaaga cccttgtgaa gattaaaaga atgagttttg tcatggaata tgttggagag
901 gtaatcacaa gtgaagaagc tgaaagacga ggacagttct atgacaacaa gggaatcacg
961 tatctctttg atctggacta tgagtctgat gaattcacag tggatgcggc tcgatacggc
1021 aatgtgtctc attttgtgaa tcacagctgt gacccaaatc ttcaggtgtt caatgttttc
1081 attgataacc tcgatactcg tcttccccga atagcattgt tttccacaag aaccataaat
1141 gctggagaag agctgacttt tgattatcaa atgaaaggtt ctggagatat atcttcagat
1201 tctattgacc acagcccagc caaaaagagg gtcagaacag tatgtaaatg tggagctgtg
1261 acttgcagag gttacctcaa ctgaactttt tcaggaaata gagctgatga ttataatatt
1321 tttttcctaa tgttaacatt tttaaaaata catatttggg actcttatta tcaaggttct
1381 acctatgtta atttacaatt catgtttcaa gacatttgcc aaatgtatta ccgatgcctc
1441 tgaaaagggg gtcactgggt ctcatagact gatatgaagt cgacatattt atagtgctta
1501 gagaccaaac taatggaagg cagactattt acagcttagt atatgtgtac ttaagtctat
1561 gtgaacagag aaatgcctcc cgtagtgttt gaaagcgtta agctgataat gtaattaaca
1621 actgctgaga gatcaaagat tcaacttgcc atacacctca aattcggaga aacagttaat
1681 ttgggcaaat ctacagttct gtttttgcta ctctattgtc attcctgttt aatactcact
1741 gtacttgtat ttgagacaaa taggtgatac tgaattttat actgttttct acttttccat
1801 taaaacattg gcacctcaat gataaagaaa tttaaggtat aaaattaaat gtaaaaatta
1861 atttcagctt catttcgtat ttcgaagcaa tctagactgt tgtgatgagt gtatgtctga
1921 acctgtaatt cttaaaagac ttcttaatct tctagaagaa aaatctccga agagctctct
1981 ctagaagtcc aaaatggcta gccattatgc ttctttgaaa ggacatgata atgggaccag
2041 gatggttttt tggagtacca agcaagggga atggagcact ttaagggcgc ctgttagtaa
2101 catgaattgg aaatctgtgt cgagtacctc tgatctaaac ggtaaaacaa gctgcctgga
2161 gagcagctgt acctaacaat actgtaatgt acattaacat tacagcctct caatttcagg
2221 caggtgtaac agttcctttc caccagattt aatattttta tacttcctgc aggttcttct
2281 taaaaagtaa tctatatttt tgaactgata cttgttttat acataaattt tttttagatg
2341 tgataaagct aaacttggcc aaagtgtgtg cctgaattat tagacctttt tattagtcaa
2401 cctacgaaga ctaaaataga atatattagt tttcaaggga gtgggaggct tccaacatag
2461 tattgaatct caggaaaaac tattctttca tgtctgattc tgagatttct aattgtgttg
2521 tgaaaatgat aaatgcagca aatctagctt tcagtattcc taatttttac ctaagctcat
2581 tgctccaggc tttgattacc taaaataagc ttggataaaa ttgaaccaac ttcaagaatg
2641 cagcacttct taatctttag ctctttcttg ggagaagcta gactttattc attatattgc
2701 tatgacaact tcactctttc ataatatata ggataaattg tttacatgat tggaccctca
2761 gattctgtta accaaaattg cagaatgggg ggccaggcct gtgtggtggc tcacacctgt
2821 gatcccagca ctttgggagg ctgaggtagg aggatcacgt gaggtcggga gttcaagacc
2881 agcctggcca tcatggtgaa accctgtctc tactgaaaat acaaaaatta gccgggcgtg
2941 gtggcacacg cctgtagtcc cagctactca ggaggctgag gcaggagaat cacttgaatt
3001 caggaggcgg aggttgcagt gagccaagat cataccactg cactgcagcc tgagtgacac
3061 agtaagactg tctccaaaaa aaaaaaaaaa aaa
//