LOCUS BC007750 1741 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tripartite motif-containing 55, mRNA (cDNA clone
MGC:12836 IMAGE:4110783), complete cds.
ACCESSION BC007750
VERSION BC007750.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1741)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1741)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC007750.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: d Column: 4
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 34878851.
FEATURES Location/Qualifiers
source 1..1741
/db_xref="H-InvDB:HIT000033420"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12836 IMAGE:4110783"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1741
/gene="TRIM55"
/gene_synonym="MURF-2"
/db_xref="GeneID:84675"
/db_xref="HGNC:HGNC:14215"
/db_xref="MIM:606469"
CDS 133..1491
/gene="TRIM55"
/gene_synonym="MURF-2"
/codon_start=1
/product="tripartite motif-containing 55"
/protein_id="AAH07750.2"
/db_xref="GeneID:84675"
/db_xref="HGNC:HGNC:14215"
/db_xref="MIM:606469"
/translation="MSASLNYKSFSKEQQTMDNLEKQLICPICLEMFTKPVVILPCQH
NLCRKCASDIFQASNPYLPTRGGTTMASGGRFRCPSCRHEVVLDRHGVYGLQRNLLVE
NIIDIYKQESTRPEKKSDQPMCEEHEEERINIYCLNCEVPTCSLCKVFGAHKDCQVAP
LTHVFQRQKSELSDGIAILVGSNDRVQGVISQLEDTCKTIEECCRKQKQELCEKFDYL
YGILEERKNEMTQVITRTQEEKLEHVRALIKKYSDHLENVSKLVESGIQFMDEPEMAV
FLQNAKTLLKKISEASKAFQMEKIEHGYENMNHFTVNLNREEKIIREIDFYREDEDEE
EEEGGEGEKEGEGEVGGEAVEVEEVENVQTEFPGEDENPEKASELSQVELQAAPGALP
VSSPEPPPALPPAADAPVTQIGFEAPPLQGQAAAPASGSGADSEPARHIFSFSWLNSL
NE"
BASE COUNT 554 a 387 c 428 g 372 t
ORIGIN
1 aaacaatgtc ctccaccgag agaaacgtaa aggacacttg atcacacaat ccctggaata
61 atatccagga aacacttgct ggagccactc gcagcaccct tccctggcag cacacttggg
121 gacagcgagg agatgagcgc atctctgaat tacaaatctt tttccaaaga gcagcagacc
181 atggataact tagagaagca actcatctgt cccatctgct tagagatgtt cacgaaacct
241 gtggtgattc tcccttgtca gcacaacctg tgtaggaaat gtgccagtga tattttccag
301 gcctctaacc cgtatttgcc cacaagagga ggtaccacca tggcatcagg gggccgattc
361 cgctgcccat cctgtagaca tgaagtggtt ttggatagac atggggtata tggacttcag
421 aggaacctgc tggtggaaaa tatcattgac atctacaagc aggagtccac caggccagaa
481 aagaaatccg accagcccat gtgcgaggaa catgaagagg agcgcatcaa catctactgt
541 ctgaactgcg aagtacccac ctgctctctg tgcaaggtgt ttggtgcaca caaagactgc
601 caggtggctc ccctcactca tgtgttccag agacagaagt ctgagctcag tgatggcatc
661 gccatcctcg tgggcagcaa cgatcgagtc cagggagtga tcagccagct ggaagacacc
721 tgcaaaacta tcgaggaatg ttgcagaaaa cagaaacaag agctttgtga gaagtttgat
781 tacctgtatg gcattttgga ggagaggaag aatgaaatga cccaagtcat tacccgaacc
841 caagaggaga aactggaaca tgtccgtgct ctgatcaaaa agtattctga tcatttggag
901 aacgtctcaa agttggttga gtcaggaatt cagtttatgg atgagccaga aatggcagtg
961 tttctgcaga atgccaaaac cctgctaaaa aaaatctcgg aagcatcaaa ggcatttcag
1021 atggagaaaa tagaacatgg ctatgagaac atgaaccact tcacagtcaa cctcaataga
1081 gaagaaaaga taatacgtga aattgacttt tacagagaag atgaagatga agaagaagaa
1141 gaaggcggag aaggagaaaa agaaggagaa ggagaagtgg gaggagaagc agtagaagtg
1201 gaagaggtag aaaatgttca aacagagttt ccaggagaag atgaaaaccc agaaaaagct
1261 tcagagctct ctcaggtgga gctgcaggct gcccctgggg cacttccagt ttcctctcca
1321 gagccacctc cagccctgcc acctgctgcg gatgcccctg tgacacagat tggatttgag
1381 gctcctcccc tccagggaca ggctgcagct ccagcgagtg gcagtggagc tgattctgag
1441 ccagctcgcc atatcttctc cttttcctgg ttgaactccc taaatgaatg atattcattc
1501 caactgctgc ccctctgtct gcctggctga gatgcatgtg ggcagcagga agcccaagtg
1561 aaattaatat tatgcagatg atgaaaggga cctctgaaca ggatttctgc aaaaatagcc
1621 ccaaactgca attccatatg acttatctaa catcttgggg ggaaagaata ttttgagaaa
1681 atagttgcag aaagcactgg aaataataaa cttgatctta tacaaaaaaa aaaaaaaaaa
1741 a
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