LOCUS BC007719 1346 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens hypoxia inducible factor 1, alpha subunit inhibitor,
mRNA (cDNA clone MGC:12605 IMAGE:4138066), complete cds.
ACCESSION BC007719
VERSION BC007719.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1346)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1346)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Dec 9, 2003 this sequence version replaced BC007719.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: k Column: 8
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 8923568.
FEATURES Location/Qualifiers
source 1..1346
/db_xref="H-InvDB:HIT000033398"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12605 IMAGE:4138066"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1346
/gene="HIF1AN"
/gene_synonym="FIH1"
/db_xref="GeneID:55662"
/db_xref="HGNC:HGNC:17113"
/db_xref="MIM:606615"
CDS 4..1053
/gene="HIF1AN"
/gene_synonym="FIH1"
/codon_start=1
/product="hypoxia inducible factor 1, alpha subunit
inhibitor"
/protein_id="AAH07719.1"
/db_xref="GeneID:55662"
/db_xref="HGNC:HGNC:17113"
/db_xref="MIM:606615"
/translation="MAATAAEAVASGSGEPREEAGALGPAWDESQLRSYSFPTRPIPR
LSQSDPRAEELIENEEPVVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLY
YDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVM
DFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIKGYKRCIL
FPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGYETVVGPGDVLYIPMY
WWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLKAHQKVAIMRNIEKMLGEALGNPQ
EVGPLLNTMIKGRYN"
BASE COUNT 359 a 323 c 359 g 305 t
ORIGIN
1 gagatggcgg cgacagcggc ggaggctgtg gcctctggct ctggagagcc ccgggaggag
61 gctggagccc tcggccccgc ctgggatgaa tcccagttgc gcagttatag cttcccgact
121 aggcccattc cgcgtctgag tcagagcgac ccccgggcag aggagcttat tgagaatgag
181 gagcctgtgg tgctgaccga cacaaatctt gtgtatcctg ccctgaaatg ggaccttgaa
241 tacctgcaag agaatattgg caatggagac ttctctgtgt acagtgccag cacccacaag
301 ttcttgtact atgatgagaa gaagatggcc aatttccaga actttaagcc gaggtccaac
361 agggaagaaa tgaaatttca tgagttcgtt gagaaactgc aggatataca gcagcgagga
421 ggggaagaga ggttgtatct gcagcaaacg ctcaatgaca ctgtgggcag gaagattgtc
481 atggacttct taggttttaa ctggaactgg attaataagc aacagggaaa gcgtggctgg
541 gggcagctta cctctaacct gctgctcatt ggcatggaag gaaatgtgac acctgctcac
601 tatgatgagc agcagaactt ttttgctcag ataaaaggtt acaaacgatg catcttattc
661 cctccggatc agttcgagtg cctctaccca taccctgttc atcacccatg tgacagacag
721 agccaggtgg actttgacaa tcccgactac gagaggttcc ctaatttcca aaatgtggtt
781 ggttacgaaa cagtggttgg ccctggtgat gttctttaca tcccaatgta ctggtggcat
841 cacatagagt cattactaaa tggggggatt accatcactg tgaacttctg gtataagggg
901 gctcccaccc ctaagagaat tgaatatcct ctcaaagctc atcagaaagt ggccataatg
961 agaaacattg agaagatgct tggagaggcc ttggggaacc cacaagaggt ggggcccttg
1021 ttgaacacaa tgatcaaggg ccgatacaac tagcctgcca ggggtcaagg cctcctgcca
1081 ggtgactgct atcccgtcca caccgcttca ttgatgagga caggagactc caagcgctag
1141 tattgcacgc tgcacttaat ggactggact cttgccatgg cccaggagtc aggtgtttgg
1201 agcgaggcag ggcagttggc actccactcc tatttggagg gacttcatac ccttgcctct
1261 tgtgccccag caccttctct ctctgccccc cgcctaaagt cctgcattca gtgtgtggaa
1321 aaaaaaaaaa aaaaaaaaaa aaaaaa
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