LOCUS BC007714 1766 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens DNA-damage-inducible transcript 4, mRNA (cDNA clone
MGC:12610 IMAGE:4302878), complete cds.
ACCESSION BC007714
VERSION BC007714.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1766)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1766)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 17 Row: o Column: 1
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 56676369.
FEATURES Location/Qualifiers
source 1..1766
/db_xref="H-InvDB:HIT000033396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:12610 IMAGE:4302878"
/tissue_type="Uterus, leiomyosarcoma"
/clone_lib="NIH_MGC_46"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1766
/gene="DDIT4"
/gene_synonym="Dig2"
/gene_synonym="FLJ20500"
/gene_synonym="REDD-1"
/gene_synonym="REDD1"
/gene_synonym="RP11-442H21.1"
/gene_synonym="RTP801"
/db_xref="GeneID:54541"
/db_xref="HGNC:HGNC:24944"
/db_xref="MIM:607729"
CDS 191..889
/gene="DDIT4"
/gene_synonym="Dig2"
/gene_synonym="FLJ20500"
/gene_synonym="REDD-1"
/gene_synonym="REDD1"
/gene_synonym="RP11-442H21.1"
/gene_synonym="RTP801"
/codon_start=1
/product="DNA-damage-inducible transcript 4"
/protein_id="AAH07714.1"
/db_xref="GeneID:54541"
/db_xref="HGNC:HGNC:24944"
/db_xref="MIM:607729"
/translation="MPSLWDRFSSSSTSSSPSSLPRTPTPDRPPRSAWGSATREEGFD
RSTSLESSDCESLDSSNSGFGPEEDTAYLDGVSLPDFELLSDPEDEHLCANLMQLLQE
SLAQARLGSRRPARLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSV
GQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLFSSANSPFLPGFSQSLTLSTGFRVIK
KKLYSSEQLLIEEC"
BASE COUNT 367 a 462 c 544 g 393 t
ORIGIN
1 gccaaggggg aggtgcgagc gtggacctgg gacgggtctg ggcggctctc ggtggttggc
61 acgggttcgc acacccattc aagcggcagg acgcacttgt cttagcagtt ctcgctgacc
121 gcgctagctg cggcttctac gctccggcac tctgagttca tcagcaaacg ccctggcgtc
181 tgtcctcacc atgcctagcc tttgggaccg cttctcgtcg tcgtccacct cctcttcgcc
241 ctcgtccttg ccccgaactc ccaccccaga tcggccgccg cgctcagcct gggggtcggc
301 gacccgggag gaggggtttg accgctccac gagcctggag agctcggact gcgagtccct
361 ggacagcagc aacagtggct tcgggccgga ggaagacacg gcttacctgg atggggtgtc
421 gttgcccgac ttcgagctgc tcagtgaccc tgaggatgaa cacttgtgtg ccaacctgat
481 gcagctgctg caggagagcc tggcccaggc gcggctgggc tctcgacgcc ctgcgcgcct
541 gctgatgcct agccagttgg taagccaggt gggcaaagaa ctactgcgcc tggcctacag
601 cgagccgtgc ggcctgcggg gggcgctgct ggacgtctgc gtggagcagg gcaagagctg
661 ccacagcgtg ggccagctgg cactcgaccc cagcctggtg cccaccttcc agctgaccct
721 cgtgctgcgc ctggactcac gactctggcc caagatccag gggctgttta gctccgccaa
781 ctctcccttc ctccctggct tcagccagtc cctgacgctg agcactggct tccgagtcat
841 caagaagaag ctgtacagct cggaacagct gctcattgag gagtgttgaa cttcaacctg
901 agggggccga cagtgccctc caagacagag acgactgaac ttttggggtg gagactagag
961 gcaggagctg agggactgat tcctgtggtt ggaaaactga ggcagccacc taaggtggag
1021 gtgggggaat agtgtttccc aggaagctca ttgagttgtg tgcgggtggc tgtgcattgg
1081 ggacacatac ccctcagtac tgtagcatga aacaaaggct taggggccaa caaggcttcc
1141 agctggatgt gtgtgtagca tgtaccttat tatttttgtt actgacagtt aacagtggtg
1201 tgacatccag agagcagctg ggctgctccc gccccagcct ggcccagggt gaaggaagag
1261 gcacgtgctc ctcagagcag ccggagggag gggggaggtc ggaggtcgtg gaggtggttt
1321 gtgtatctta ctggtctgaa gggaccaagt gtgtttgttg tttgttttgt atcttgtttt
1381 tctgatcgga gcatcactac tgacctgttg taggcagcta tcttacagac gcatgaatgt
1441 aagagtagga aggggtgggt gtcagggatc acttgggatc tttgacactt gaaaaattac
1501 acctggcagc tgcgtttaag ccttccccca tcgtgtactg cagagttgag ctggcagggg
1561 aggggctgag agggtggggg ctggaacccc tccccgggag gagtgccatc tgggtcttcc
1621 atctagaact gtttacatga agataagata ctcactgttc atgaatacac ttgatgttca
1681 agtattaaga cctatgcaat attttttact tttctaataa acatgtttgt taaaacaaaa
1741 aaaataaaaa aaaaaaaaaa aaaaaa
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