LOCUS BC007692 2310 bp mRNA linear HUM 28-SEP-2004
DEFINITION Homo sapiens spastic paraplegia 7, paraplegin (pure and complicated
autosomal recessive), mRNA (cDNA clone IMAGE:3956605).
ACCESSION BC007692
VERSION BC007692.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2310)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2310)
AUTHORS Director MGC Project.
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 15 Row: c Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40806171.
FEATURES Location/Qualifiers
source 1..2310
/db_xref="H-InvDB:HIT000033383"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3956605"
/tissue_type="Placenta, choriocarcinoma"
/clone_lib="NIH_MGC_21"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
BASE COUNT 503 a 628 c 710 g 469 t
ORIGIN
1 acgagggcca acatggccgt gctgctgctg ctgctccgtg ccctccgccg gggtccaggc
61 ccgggtcctc ggccgctgtg gggcccaggc ccggcctgga gtccagggtt ccccgccagg
121 cccgggaggg ggcggccgta catggccagc aggcctccgg gggacctcgc cgaggctgta
181 ggccgagctc tgcagagctt acaattgaga ctgctaaccc ctacctttga agggatcaac
241 ggattgttgt tgaaacaaca tttagttcag aatccagtca gactctggca acttttaggt
301 ggtactttct attttaacac ctcaaggttg aagcagaaga ataaggagaa ggataagtcg
361 aaggggaagg cgcctgaaga ggacgaagag gagaggagac gccgtgagcg ggacgaccag
421 atgtaccgag agcggctgcg caccttgctg gtcatcgcgg ttgtcatgag cctcctgaat
481 gctctcagca ccagcggagg cagcatttcc tggaacgact ttgtccacga gatgctggcc
541 aagggcgagg tgcagcgcgt ccaggtggtg cctgagagcg acgtggtgga agtctacctg
601 caccctggag ccgtggtgtt tgggcggcct cggctagcct tgatgtaccg aatgcaggtt
661 gcaaatattg acaagtttga agagaagctt cgagcagctg aagatgagct gaatatcgag
721 gccaaggaca ggatcccagt ttcctacaag cgaacaggat tctttggaaa tgccctgtac
781 tctgtgggga tgacggcagt gggcctggcc atcctgtggt atgttttccg tctggccggg
841 atgactggaa gggaaggtgg attcagtgct tttaatcagc ttaaaatggc tcgtttcacc
901 attgtggatg ggaagatggg gaaaggagtc agcttcaaag acgtggcagg aatgcacgaa
961 gccaaactgg aagtccgcga gtttgtggat tatctgaaga gcccagaacg cttcctccag
1021 cttggcgcca aggtcccaaa gggcgcactg ctgctcggcc cccccggctg tgggaagacg
1081 ctgctggcca aggcggtggc cacggaggct caggtgccct tcctggcgat ggccggccca
1141 gagttcgtgg aggtcattgg aggcctcggc gctgcccgtg tgcggagcct ctttaaggaa
1201 gcccgagccc gggccccctg catcgtctac atcgatgaga tcgacgcggt gggcaagaag
1261 cgctccacca ccatgtccgg cttctccaac acgtaggagg agcagacgct caaccagctt
1321 ctggtagaaa tggatggtgc ctctcttgac cagctaccct cccaggggac catgaggaag
1381 ctcagaggaa agacccccgc ctgctcctgt ctcacggagc ccacagggtc acggagggca
1441 atggagggtc attcgctctg ctggggttgc cttttgcact gaagatagag accacctttt
1501 tgagtgactt gagcccaaag gcaagcgtat atcaaacgat cttctccaca taacctctct
1561 gtgccatcat aagaatagct gcttccgccc ccggatttgc tcaggcctgg gaatccgctg
1621 actgaaggcc tcttgttgag tgccagctct aaacaagtcc ctttatgcag agccacagct
1681 gtgcatgctc agccctgccg aggtcccagg ccaggctttg ttgcttccgt tcatggaagc
1741 gcacaggatg gggccgacgc tgtgccggtc gtggggaaat ctcactgggg aagagaaaag
1801 cccaagcctt gttggttacg tcagccggtc catggcggtg tcctgcggac cccagagccc
1861 ccgggaaggg cgcaagtcaa agagcactgg aggcaccgcc ggcgatggac gtccaggtcc
1921 cggctcctgt gctggaaagc gttgatgggg agcgtcggcg ctgaccacac gcgggagctg
1981 cggaagccca gcggttcaca caggcctccc ttcaacgtag tcatcccctg gtggtggaag
2041 caagacgacg gcccctgacg tgcagccaca cacagaaaag gctgctgtga acattttatg
2101 cttcgacttt ttttttcttc agagacaggg tgtcgttctg tcgcccaggc tggagtgcag
2161 tgccaccatc atagctcact gcagcctcca cctcctaggc tcaagcttcc taagtagttg
2221 ggactcaagg cttgagtcac catgccaggc tctgtttttt cagtctgtga aaaataaagt
2281 catcagcatg tgaaaaaaaa aaaaaaaaaa
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