LOCUS BC007673 3645 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens lymphocyte cytosolic protein 1 (L-plastin), mRNA (cDNA
clone MGC:831 IMAGE:3143290), complete cds.
ACCESSION BC007673
VERSION BC007673.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 4 Row: h Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 7382490.
FEATURES Location/Qualifiers
source 1..3645
/db_xref="H-InvDB:HIT000033370"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:831 IMAGE:3143290"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3645
/gene="LCP1"
/gene_synonym="CP64"
/gene_synonym="L-PLASTIN"
/gene_synonym="LC64P"
/gene_synonym="PLS2"
/db_xref="GeneID:3936"
/db_xref="HGNC:HGNC:6528"
/db_xref="MIM:153430"
CDS 77..1960
/gene="LCP1"
/gene_synonym="CP64"
/gene_synonym="L-PLASTIN"
/gene_synonym="LC64P"
/gene_synonym="PLS2"
/codon_start=1
/product="lymphocyte cytosolic protein 1 (L-plastin)"
/protein_id="AAH07673.1"
/db_xref="GeneID:3936"
/db_xref="HGNC:HGNC:6528"
/db_xref="MIM:153430"
/translation="MARGSVSDEEMMELREAFAKVDTDGNGYISFNELNDLFKAACLP
LPGYRVREITENLMATGDLDQDGRISFDEFIKIFHGLKSTDVAKTFRKAINKKEGICA
IGGTSEQSSVGTQHSYSEEEKYAFVNWINKALENDPDCRHVIPMNPNTNDLFNAVGDG
IVLCKMINLSVPDTIDERTINKKKLTPFTIQENLNLALNSASAIGCHVVNIGAEDLKE
GKPYLVLGLLWQVIKIGLFADIELSRNEALIALLREGESLEDLMKLSPEELLLRWANY
HLENAGCNKIGNFSTDIKDSKAYYHLLEQVAPKGDEEGVPAVVIDMSGLREKDDIQRA
ECMLQQAERLGCRQFVTATDVVRGNPKLNLAFIANLFNRYPALHKPENQDIDWGALEG
ETREERTFRNWMNSLGVNPRVNHLYSDLSDALVIFQLYEKIKVPVDWNRVNKPPYPKL
GGNMKKLENCNYAVELGKNQAKFSLVGIGGQDLNEGNRTLTLALIWQLMRRYTLNILE
EIGGGQKVNDDIIVNWVNETLREAEKSSSISSFKDPKISTSLPVLDLIDAIQPGSINY
DLLKTENLNDDEKLNNAKYAISMARKIGARVYALPEDLVEVNPKMVMTVFACLMGKGM
KRV"
BASE COUNT 1052 a 808 c 838 g 947 t
ORIGIN
1 ggggttcctg gtcatacacc agtactacca aggacagctt ttttcctgca agatctgtta
61 cctaaagcaa taaaaaatgg ccagaggatc agtgtccgat gaggaaatga tggagctcag
121 agaagctttt gccaaagttg atactgatgg caatggatac atcagcttca atgagttgaa
181 tgacttgttc aaggctgctt gcttgccttt gcctgggtat agagtacgag aaattacaga
241 aaacctgatg gctacaggtg atctggacca agatggaagg atcagctttg atgagtttat
301 caagattttc catggcctaa aaagcacaga tgttgccaag acctttagaa aagcaatcaa
361 taagaaggaa gggatttgtg caatcggtgg tacttcagag cagtctagcg ttggcaccca
421 acactcctat tcagaggaag aaaagtatgc ctttgtcaac tggataaaca aagccctgga
481 aaatgatcct gattgtcggc atgtcatccc aatgaaccca aacacgaatg atctctttaa
541 tgctgttgga gatggcattg tcctttgtaa aatgatcaac ctgtcagtgc cagacacaat
601 tgatgaaaga acaatcaaca aaaagaagct aacccctttc accattcagg aaaatctgaa
661 cttggctctg aactctgcct cagccatcgg gtgccatgtg gtcaacatag gggctgagga
721 cctgaaggag gggaagcctt atctggtcct gggacttctg tggcaagtca tcaagattgg
781 gttgtttgct gacattgaac tcagcagaaa tgaagctctg attgctcttt tgagagaagg
841 tgagagcctg gaggatttga tgaaactctc ccctgaagag ctcttgctga ggtgggctaa
901 ttaccacctg gaaaatgcag gctgcaacaa aattggcaac ttcagtactg acatcaagga
961 ctcaaaagct tattaccacc tgcttgagca ggtggctcca aaaggagatg aagaaggtgt
1021 tcctgctgtt gttattgaca tgtcaggact gcgggagaag gatgacatcc agagggcaga
1081 atgcatgctg cagcaggcgg agaggctggg ctgccggcag tttgtcacag ccacagatgt
1141 tgtccgaggg aaccccaagt tgaacttggc ttttattgcc aacctcttta acagataccc
1201 tgccctgcac aaaccagaga accaggacat tgactggggg gctcttgaag gtgagacgag
1261 agaagagcgg acatttagga actggatgaa ctccctgggt gttaaccctc gagtcaatca
1321 tttgtacagt gacttatcag atgccctggt catcttccag ctctatgaaa agatcaaagt
1381 tcctgttgac tggaacagag taaacaaacc gccatacccc aaactgggag gcaatatgaa
1441 gaagcttgag aattgtaact acgcggtaga attggggaag aatcaagcga agttctccct
1501 ggttggcatc ggtggacaag atctcaatga aggaaaccgc actctcacac tggccttgat
1561 ttggcagcta atgagaaggt atacactgaa tatcctcgaa gaaattggtg gtggccagaa
1621 ggtcaatgat gacattattg tcaactgggt gaatgaaaca ttgagggaag cagagaaaag
1681 ttcatccatc tctagtttca aggacccgaa gattagtaca agtctgcctg ttctggacct
1741 catcgatgcc atccaaccag gttccattaa ctatgacctt ctgaagacag aaaatctgaa
1801 tgatgatgag aaactcaaca atgcaaaata tgccatctct atggcccgaa aaattggagc
1861 aagagtgtat gccctgccag aagacctggt tgaagtgaac cccaaaatgg tcatgaccgt
1921 gtttgcctgc ctcatgggga aaggaatgaa gagggtgtga ggcccaatgg ggctgggtgg
1981 gaggcggtgc actcactcct gactgcccgg cacagatgct ccagggatga ttcaagccat
2041 tccaaagttc aacttggtga cactctataa gattccaaaa agcacatatt agtgcagcca
2101 agtagcctct cctgtattta acaaaaagtg cttcattctt tgcaggaggc ccaacctcct
2161 atatataggt ttctattctt gatttatttg cttcttcgaa aatctagagg aaaagaaaga
2221 agttattttc caggtaccct tctcgctttt gccattagcc aaggatagaa gctgcagtgg
2281 tattaatttt gatataatct ttcaaaccag cttcatgtgg cttccctttt ctttgttcaa
2341 gatgagggcc aggaggggaa acatcacacc tgccctaaac cctgttcctg gaggtcagca
2401 tttgatctgt tgcaagcccc tctttctgtc ccctcttcct accctgcctc ccatgacttt
2461 gctcctcaca cttttggaac catgccttcc gggggggccc atctcttctg gccgtccttg
2521 tctctgggcc acttggagtg tgtgataaat cagtcaagct gttgaagtct caggagtctc
2581 tggtagcctg cagaagtaag cctcatcatc agagcctttc ctcaaaactg gagtcccaaa
2641 tgtcatcagg ttttgttttt tttcagccac taagaacccc tctgctttta actctagaat
2701 ttgggcttgg accagatcta acatcttgaa tactctgccc tctagagcct tcagccttaa
2761 tggaaggttg gatccaagga gggtgtaatg gagcatcaag ccactcggcg gcagcatgga
2821 gctataacta agcatccttt agggttctgc ctctccaggc atttagccct cacattagat
2881 ctagttactg tggtatggct aatacctgtc aacatttgga ggcaatccta ccttgctttt
2941 gcttctagag cttagcatat ctgattgttg tcaggccata ttatcaatgt ttactttttt
3001 ggtactataa aagctttctg ccacccctaa actccagggg ggaaaatatg tgccaatcaa
3061 tagcacccct actcacatac acacacacct agccagctgt caagggcaga atgaatctat
3121 gctggataag aaatggtgga actgcgttat gaagagctaa tttactggac aaagaattcc
3181 aaagcaaaac cagaacagta tgaatttgag caggtctcat aggttgagca atttccccct
3241 aaaccaactg aaggctaaaa agcaacaggc cattgtgaac caatgcaaga cgccctctat
3301 catggtgaaa agctccatca atgaggtatc ttctttagtg gtggtatgta atggaactta
3361 gccatttttc aaagcaattg aaatgcattg ctctggatct gttccttggc agtggactca
3421 gaaagccaac atgtggctcc tcccagccca taaccagtat ttttgctgct tctgaataca
3481 aattggttgg ttttgacttc agattgaact tactgtagcc tcagatgatt tcccccctcc
3541 gcctccagga agaaagaatg ttactgcctt aataaaaaat gaaaagagaa tgatgctcaa
3601 aatctttcca aataaaatgt tccctataaa aaaaaaaaaa aaaaa
//