LOCUS BC007638 2586 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens HHIP-like 2, mRNA (cDNA clone MGC:15905
IMAGE:3533045), complete cds.
ACCESSION BC007638
VERSION BC007638.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2586)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2586)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 23 Row: i Column: 5
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21362001.
FEATURES Location/Qualifiers
source 1..2586
/db_xref="H-InvDB:HIT000086872"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15905 IMAGE:3533045"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2586
/gene="HHIPL2"
/gene_synonym="RP11-378J18.1"
/db_xref="GeneID:79802"
/db_xref="HGNC:HGNC:25842"
CDS 45..2219
/gene="HHIPL2"
/gene_synonym="RP11-378J18.1"
/codon_start=1
/product="HHIP-like 2"
/protein_id="AAH07638.1"
/db_xref="GeneID:79802"
/db_xref="HGNC:HGNC:25842"
/translation="MLRTSTPNLCGGLHCRAPWLSSGILCLCLIFLLGQVGLLQGHPQ
CLDYGPPFQPPLHLEFCSDYESFGCCDQHKDRRIAARYWDIMEYFDLKRHELCGDYIK
DILCQECSPYAAHLYDAENTQTPLRNLPGLCSDYCSAFHSNCHSAISLLTNDRGLQES
HGRDGTRFCHLLDLPDKDYCFPNVLRNDYLNRHLGMVAQDPQGCLQLCLSEVANGLRN
PVSMVHAGDGTHRFFVAEQVGVVWVYLPDGSRLEQSFLDLKNIVLTTPWIGDERGFLG
LAFHPKFRHNRKFYIYYSCLDKKKVEKIRISEMKVSRADPNKADLKSERVILEIEEPA
SNHNGGQLLFGLDGYMYIFTGDGGQAGDPFGLFGNAQNKSSLLGKVLRIDVNRAGSHG
KRYRVPSDNPFVSEPGAHPAIYAYGIRNMWRCAVDRGDPITRQGRGRIFCGDVGQNRF
EEVDLILKGGNYGWRAKEGFACYDKKLCHNASLDDVLPIYAYGHAVGKSVTGGYVYRG
CESPNLNGLYIFGDFMSGRLMALQEDRKNKKWKKQDLCLGSTTSCAFPGLISTHSKFI
ISFAEDEAGELYFLATSYPSAYAPRGSIYKFVDPSRRAPPGKCKYKPVPVRTKSKRIP
FRPLAKTVLDLLKEQSEKAARKSSSATLASGPAQGLSEKGSSKKLASPTSSKNTLRGP
GTKKKARVGPHVRQGKRRKSLKSHSGRMRPSAEQKRAGRSLP"
BASE COUNT 640 a 668 c 685 g 593 t
ORIGIN
1 ccaacctgag caaacacagc agcccgagtg ttcccaaggc caaaatgctg agaacgtcca
61 ctcctaatct gtgtggtggt ctgcattgcc gggccccctg gctctcttct ggcattctct
121 gcctctgcct catattcttg ttaggccagg tgggcttgct gcagggacac ccccagtgcc
181 tggattacgg gccccctttc cagccccctc tgcaccttga gttttgctct gactatgagt
241 ccttcggctg ctgtgatcag cacaaggacc gccgcatcgc tgcccggtac tgggacatca
301 tggaatattt tgatctgaag agacatgagc tgtgtggaga ttacattaaa gacatccttt
361 gccaggagtg ctcgccctac gcagcccacc tctacgacgc cgaaaacacc cagacgcctc
421 tccggaatct cccgggcctc tgctctgatt actgctctgc cttccattct aactgtcact
481 cagccatttc cctgctgacc aatgaccgcg gcctccagga gtctcatgga agggacggta
541 cccgcttctg ccacctcctg gaccttcctg acaaggacta ttgcttccct aatgtcctga
601 ggaacgacta tctcaaccgc cacctgggca tggtggccca agatcctcag ggctgcctgc
661 agctctgcct gagcgaggtg gccaacgggc tgaggaaccc cgtctccatg gtccatgctg
721 gggacggcac ccatcgcttc tttgttgccg agcaggtagg agtggtgtgg gtctacctcc
781 ctgatgggag tcgcctggag caatccttcc tggacctcaa gaacatcgtg ttgaccaccc
841 catggatcgg ggatgagaga ggcttcttgg ggttggcttt tcaccccaaa ttccgccaca
901 atcgcaagtt ctatatttat tattcgtgcc tggacaagaa gaaggtagaa aagatccgaa
961 ttagtgagat gaaggtttct cgggctgatc ctaacaaagc tgacctgaaa tcagagaggg
1021 tcatcttgga gattgaagaa ccagcctcaa accataatgg cggacaactt ctttttggcc
1081 tggatggcta tatgtacata ttcactgggg acgggggaca ggctggagat ccctttggcc
1141 tgtttggaaa tgctcagaac aaaagttccc tgctgggaaa agttttaagg atcgatgtga
1201 acagggcagg ctcacatggc aagcggtacc gagtcccctc ggacaatcca tttgtttctg
1261 agccaggggc ccaccccgcc atctatgcct atgggatcag gaacatgtgg cgttgtgctg
1321 tggaccgagg ggaccccatc acgcgccagg gccgaggccg gatattctgt ggggacgtgg
1381 gccagaacag gtttgaagag gttgacctca ttttgaaagg tggaaactat ggctggagag
1441 caaaggaagg gtttgcatgt tatgacaaaa aactttgtca caatgcctct ttggatgatg
1501 ttctgccaat ctatgcttat ggccatgcag tggggaagtc agtcactgga ggttatgtct
1561 atcgtggttg tgaatcccca aatctcaatg gcctgtatat ctttggagac ttcatgagtg
1621 gtcgacttat ggctttgcag gaagatagaa aaaacaagaa atggaagaag caggatcttt
1681 gcctgggcag caccacgtcc tgtgccttcc cagggctgat cagcacccat agcaagttca
1741 tcatctcctt tgctgaagat gaagcagggg agctgtattt cctggcgacc tcttacccaa
1801 gtgcctatgc accacgtgga tctatttaca agtttgttga cccctcaagg cgagcacccc
1861 caggcaagtg caaatacaag ccagtgcccg tgagaaccaa gagtaagcgg atcccgttca
1921 gaccactcgc caagacagtc ttggacttgc taaaggaaca atcagagaaa gctgctagaa
1981 aatcttccag tgcaacctta gcttctggcc cagcccaggg tttgtctgag aaaggctcct
2041 ccaagaagct ggcttctcct acaagcagca agaatacatt gcgagggcct ggtacaaaga
2101 agaaagccag agtggggccc cacgtccgcc agggcaagag gaggaagagc ctgaaaagcc
2161 acagtggcag gatgaggcca tcagcagagc agaagcgagc tggcagaagt ctcccttgac
2221 ctattggtca aggtggccga cagggtgacg tgagagagga gagccacctc atcaaatgaa
2281 agtcactgct gaataaagac cttagaagtc tgggaagcca gggtagaggt ggggcagggc
2341 ggttttcctc tccctgggaa atcttgctgt ctactgaata aataaatgca ccttctctgt
2401 atgcagtgct tctgtgggag accatatccc agattgctgg tgcacctggg ttatggtaag
2461 cactagtcca tgagcctgct tggaatcaca ctggatgtct ccgttttgtc ttgtaaatgc
2521 ctacaacctg aggtaataaa tcaacatttg ctcaaactgg aaaaaaaaaa aaaaaaaaaa
2581 aaaaaa
//