LOCUS BC007625 1765 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens stromal cell derived factor 4, mRNA (cDNA clone MGC:15780 IMAGE:3503540), complete cds. ACCESSION BC007625 VERSION BC007625.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1765) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1765) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 23 Row: c Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 18699731. FEATURES Location/Qualifiers source 1..1765 /db_xref="H-InvDB:HIT000033341" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:15780 IMAGE:3503540" /tissue_type="Brain, neuroblastoma" /clone_lib="NIH_MGC_19" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..1765 /gene="SDF4" /gene_synonym="Cab45" /gene_synonym="RP5-902P8.6" /db_xref="GeneID:51150" /db_xref="HGNC:HGNC:24188" CDS 79..1167 /gene="SDF4" /gene_synonym="Cab45" /gene_synonym="RP5-902P8.6" /codon_start=1 /product="stromal cell derived factor 4" /protein_id="AAH07625.1" /db_xref="GeneID:51150" /db_xref="HGNC:HGNC:24188" /translation="MVWPWVAMASRWGPLIGLAPCCLWLLGAVLLMDASARPANHSST RERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRK LMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWD EYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTE EEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDD NWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHL EPEEVLKYSEFFTGSKLVDYARSVHEEF" BASE COUNT 380 a 545 c 550 g 290 t ORIGIN 1 ggagccagga cctcacttcc tcctctgccc ctgcccctgc ccctcccagc acctggccca 61 caccctgcag cccgccccat ggtctggccc tgggtggcga tggcgtccag gtggggtccc 121 ctcattggcc tggctccgtg ctgcctctgg ctcctggggg cagtccttct gatggacgcg 181 tctgcacggc ctgccaacca ctcgtccact cgagagagag tagccaacag ggaggagaat 241 gagatcctgc ccccagacca cctgaacggg gtgaagctgg agatggacgg gcacctcaat 301 cgcggcttcc accaggaggt cttcctaggc aaggacctgg gtggctttga tgaggacgcg 361 gagccgcggc ggagccggag gaagctgatg gtcatctttt ccaaggtgga tgtgaacact 421 gaccggaaga tcagtgccaa ggagatgcag cgctggatca tggagaagac ggccgagcac 481 ttccaggagg ccatggagga gagcaagaca cacttccgcg ccgtggaccc tgacggggac 541 ggtcacgtgt cttgggacga gtataaggtg aagtttttgg cgagtaaagg ccatagcgag 601 aaggaggttg ccgacgccat caggctcaac gaggaactca aagtggacga ggaaacacag 661 gaagtcctgg agaacctgaa ggaccgctgg taccaggcgg acagcccccc tgcagacctg 721 ctgctgacgg aggaggagtt cctgtcgttc ctccaccccg agcacagccg gggaatgctc 781 aggttcatgg tgaaggagat cgtccgggac ctggaccagg acggtgacaa gcagctctct 841 gtgcccgagt tcatctccct gcccgtgggc accgtggaga accagcaggg ccaggacatt 901 gacgacaact gggtgaaaga cagaaaaaag gagtttgagg agctcattga ctccaaccac 961 gacggcatcg tgaccgccga ggagctggag agctacatgg accccatgaa cgagtacaac 1021 gcgctgaacg aggccaagca gatgatcgcc gtcgccgacg agaaccagaa ccaccacctg 1081 gagcccgagg aggtgctcaa gtacagcgag ttcttcacgg gcagcaagct ggtggactac 1141 gcgcgcagcg tgcacgagga gttttgagcg cccggccgcg ccccgcgccg ccccccacgc 1201 accaccgggg cggcctcgcg ggtgactccg ggctccgtgg ctgtcccgga ccccacctct 1261 tccctgccgc ccgccaccgg ccgaccgacc gcggctgccc cagttgatga gcggcgtgtc 1321 ccctctgcag cgcgcacccc ggcggggctt tggctgtgac gcggtcgggg cgcggggctg 1381 ggctgtggcc ccgcggcgcc gcctcctccc tggtccctcg aaatcgttgc atctcacttc 1441 tgagaacgaa atctcgcttc agtcactctg ccgaaggcgc tgacggcatc gcggccggaa 1501 cctctgggcc cggcccctcc cagggccgcc gctccgtggg aaaaaacagc tcctccattt 1561 ccttgaaaac tgaacgatta ttaaaaatag attaaacttc gctggaaatg agtagccagg 1621 aagttcaggg gagggtgccg ggtccttccc gggcctggcg tgtcggagcc acccaggtcc 1681 cgcagctgcc gctgagaaaa tgcaaatatt tgttgtgaca agaatcacat acatttactt 1741 taaatataaa aaaaaaaaaa aaaaa //