LOCUS       BC007625                1765 bp    mRNA    linear   HUM 15-JUL-2006
DEFINITION  Homo sapiens stromal cell derived factor 4, mRNA (cDNA clone
            MGC:15780 IMAGE:3503540), complete cds.
ACCESSION   BC007625
VERSION     BC007625.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1765)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1765)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (10-MAY-2001) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: ATCC
            cDNA Library Preparation: Rubin Laboratory
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAL Plate: 23 Row: c Column: 3
            This clone was selected for full length sequencing because it
            passed the following selection criteria: matched mRNA gi: 18699731.
FEATURES             Location/Qualifiers
     source          1..1765
                     /db_xref="H-InvDB:HIT000033341"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:15780 IMAGE:3503540"
                     /tissue_type="Brain, neuroblastoma"
                     /clone_lib="NIH_MGC_19"
                     /lab_host="DH10B-R"
                     /note="Vector: pOTB7"
     gene            1..1765
                     /gene="SDF4"
                     /gene_synonym="Cab45"
                     /gene_synonym="RP5-902P8.6"
                     /db_xref="GeneID:51150"
                     /db_xref="HGNC:HGNC:24188"
     CDS             79..1167
                     /gene="SDF4"
                     /gene_synonym="Cab45"
                     /gene_synonym="RP5-902P8.6"
                     /codon_start=1
                     /product="stromal cell derived factor 4"
                     /protein_id="AAH07625.1"
                     /db_xref="GeneID:51150"
                     /db_xref="HGNC:HGNC:24188"
                     /translation="MVWPWVAMASRWGPLIGLAPCCLWLLGAVLLMDASARPANHSST
                     RERVANREENEILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLGGFDEDAEPRRSRRK
                     LMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWD
                     EYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTE
                     EEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDD
                     NWVKDRKKEFEELIDSNHDGIVTAEELESYMDPMNEYNALNEAKQMIAVADENQNHHL
                     EPEEVLKYSEFFTGSKLVDYARSVHEEF"
BASE COUNT          380 a          545 c          550 g          290 t
ORIGIN      
        1 ggagccagga cctcacttcc tcctctgccc ctgcccctgc ccctcccagc acctggccca
       61 caccctgcag cccgccccat ggtctggccc tgggtggcga tggcgtccag gtggggtccc
      121 ctcattggcc tggctccgtg ctgcctctgg ctcctggggg cagtccttct gatggacgcg
      181 tctgcacggc ctgccaacca ctcgtccact cgagagagag tagccaacag ggaggagaat
      241 gagatcctgc ccccagacca cctgaacggg gtgaagctgg agatggacgg gcacctcaat
      301 cgcggcttcc accaggaggt cttcctaggc aaggacctgg gtggctttga tgaggacgcg
      361 gagccgcggc ggagccggag gaagctgatg gtcatctttt ccaaggtgga tgtgaacact
      421 gaccggaaga tcagtgccaa ggagatgcag cgctggatca tggagaagac ggccgagcac
      481 ttccaggagg ccatggagga gagcaagaca cacttccgcg ccgtggaccc tgacggggac
      541 ggtcacgtgt cttgggacga gtataaggtg aagtttttgg cgagtaaagg ccatagcgag
      601 aaggaggttg ccgacgccat caggctcaac gaggaactca aagtggacga ggaaacacag
      661 gaagtcctgg agaacctgaa ggaccgctgg taccaggcgg acagcccccc tgcagacctg
      721 ctgctgacgg aggaggagtt cctgtcgttc ctccaccccg agcacagccg gggaatgctc
      781 aggttcatgg tgaaggagat cgtccgggac ctggaccagg acggtgacaa gcagctctct
      841 gtgcccgagt tcatctccct gcccgtgggc accgtggaga accagcaggg ccaggacatt
      901 gacgacaact gggtgaaaga cagaaaaaag gagtttgagg agctcattga ctccaaccac
      961 gacggcatcg tgaccgccga ggagctggag agctacatgg accccatgaa cgagtacaac
     1021 gcgctgaacg aggccaagca gatgatcgcc gtcgccgacg agaaccagaa ccaccacctg
     1081 gagcccgagg aggtgctcaa gtacagcgag ttcttcacgg gcagcaagct ggtggactac
     1141 gcgcgcagcg tgcacgagga gttttgagcg cccggccgcg ccccgcgccg ccccccacgc
     1201 accaccgggg cggcctcgcg ggtgactccg ggctccgtgg ctgtcccgga ccccacctct
     1261 tccctgccgc ccgccaccgg ccgaccgacc gcggctgccc cagttgatga gcggcgtgtc
     1321 ccctctgcag cgcgcacccc ggcggggctt tggctgtgac gcggtcgggg cgcggggctg
     1381 ggctgtggcc ccgcggcgcc gcctcctccc tggtccctcg aaatcgttgc atctcacttc
     1441 tgagaacgaa atctcgcttc agtcactctg ccgaaggcgc tgacggcatc gcggccggaa
     1501 cctctgggcc cggcccctcc cagggccgcc gctccgtggg aaaaaacagc tcctccattt
     1561 ccttgaaaac tgaacgatta ttaaaaatag attaaacttc gctggaaatg agtagccagg
     1621 aagttcaggg gagggtgccg ggtccttccc gggcctggcg tgtcggagcc acccaggtcc
     1681 cgcagctgcc gctgagaaaa tgcaaatatt tgttgtgaca agaatcacat acatttactt
     1741 taaatataaa aaaaaaaaaa aaaaa
//