LOCUS BC007605 2514 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens tubulin, beta, mRNA (cDNA clone MGC:15683
IMAGE:3350604), complete cds.
ACCESSION BC007605
VERSION BC007605.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2514)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2514)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: n Column: 15.
FEATURES Location/Qualifiers
source 1..2514
/db_xref="H-InvDB:HIT000033326_09"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15683 IMAGE:3350604"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_16"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2514
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
CDS 137..1471
/gene="TUBB"
/gene_synonym="M40"
/gene_synonym="MGC16435"
/gene_synonym="OK/SW-cl.56"
/gene_synonym="TUBB1"
/gene_synonym="TUBB5"
/codon_start=1
/product="tubulin, beta"
/protein_id="AAH07605.1"
/db_xref="GeneID:203068"
/db_xref="HGNC:HGNC:20778"
/db_xref="MIM:191130"
/translation="MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQL
DRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWA
KGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYP
DRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLT
TPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSR
GSQQYRALTVPELTQQVFDAKNMMAACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQ
NKNSSYFVEWIPNNVKTAVCDIPPRGLKMAVTFIGNSTAIQELFKRISEQFTAMFRRK
AFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEEEEDFGEEAEEEA"
BASE COUNT 608 a 691 c 582 g 633 t
ORIGIN
1 gtcgcgtttg cacctcgctg ctccagcctc tggggcgcat tccaaccttc cagcctgcga
61 cctgcggaga aaaaaaatta cttattttct tgccccatac ataccttgag gcgagcaaaa
121 aaattaaatt ttaaccatga gggaaatcgt gcacatccag gctggtcagt gtggcaacca
181 gatcggtgcc aagttctggg aggtgatcag tgatgaacat ggcatcgacc ccaccggcac
241 ctaccacggg gacagcgacc tgcagctgga ccgcatctct gtgtactaca atgaagccac
301 aggtggcaaa tatgttcctc gtgccatcct ggtggatcta gaacctggga ccatggactc
361 tgttcgctca ggtccttttg gccagatctt tagaccagac aactttgtat ttggtcagtc
421 tggggcaggt aacaactggg ccaaaggcca ctacacagag ggcgccgagc tggttgattc
481 tgtcctggat gtggtacgga aggaggcaga gagctgtgac tgcctgcagg gcttccagct
541 gacccactca ctgggcgggg gcacaggctc tggaatgggc actctcctta tcagcaagat
601 ccgagaagaa taccctgatc gcatcatgaa taccttcagt gtggtgcctt cacccaaagt
661 gtctgacacc gtggtcgagc cctacaatgc caccctctcc gtccatcagt tggtagagaa
721 tactgatgag acctattgca ttgacaacga ggccctctat gatatctgct tccgcactct
781 gaagctgacc acaccaacct acggggatct gaaccacctt gtctcagcca ccatgagtgg
841 tgtcaccacc tgcctccgtt tccctggcca gctcaatgct gacctccgca agttggcagt
901 caacatggtc cccttcccac gtctccattt ctttatgcct ggctttgccc ctctcaccag
961 ccgtggaagc cagcagtatc gagctctcac agtgccggaa ctcacccagc aggtcttcga
1021 tgccaagaac atgatggctg cctgtgaccc ccgccacggc cgatacctca ccgtggctgc
1081 tgtcttccgt ggtcggatgt ccatgaagga ggtcgatgag cagatgctta acgtgcagaa
1141 caagaacagc agctactttg tggaatggat ccccaacaat gtcaagacag ccgtctgtga
1201 catcccacct cgtggcctca agatggcagt caccttcatt ggcaatagca cagccatcca
1261 ggagctcttc aagcgcatct cggagcagtt cactgccatg ttccgccgga aggccttcct
1321 ccactggtac acaggcgagg gcatggacga gatggagttc accgaggctg agagcaacat
1381 gaacgacctc gtctctgagt atcagcagta ccaggatgcc accgcagaag aggaggagga
1441 tttcggtgag gaggccgaag aggaggccta aggcagagcc cccatcacct caggcttctc
1501 agttccctta gccgtcttac tcaactgccc ctttcctctc cctcagaatt tgtgtttgct
1561 gcctctatct tgttttttgt tttttcttct ggggggggtc tagaacagtg cctggcacat
1621 agtaggcgct caataaatac ttgtttgttg aatgtctcct ctctctttcc actctgggaa
1681 acctaggttt ctgccattct gggtgaccct gtatttcttt ctggtgccca ttccatttgt
1741 ccagttaata cttcctctta aaaatctcca agaagctggg tctccagatc ccatttagaa
1801 ccaaccaggt gctgaaaaca catgtagata atggccatca tcctaagccc aaagtagaaa
1861 atggtagaag gtagtgggta gaagtcacta tataaggaag gggatgggat tttccattct
1921 aaaagttttg gagagggaaa tccaggctat taaagtcact aaatttctaa gtatgtccat
1981 ttcccatctc agcttcaagg gaggtgtcag cagtattatc tccactttca atctccctcc
2041 aagctctact ctggaggagt ctgtcccact ctgtcaagtg gaatccttcc ctttccaact
2101 ctacctccct cactcagctc ctttcccctg atcagagaaa gggatcaagg gggttgggag
2161 gggggaaaga gaccagcctt ggtccctaag cctccagaaa cgtcttctta atccccacct
2221 tttcttactc ccaaaaaaga atgaacaccc ctgactctgg agtggtgtat actgccacat
2281 cagtgtttga gtcagtcccc agaggagagg ggaaccctcc tccatctttt ttgcaacatc
2341 tcatttcttc cttttgctgt tgcttccccc ctcacacact tggttttgtt ctatcctaca
2401 tttgagattt ctattttatg ttgaacttgc tgcttttttt catattgaaa agatgacatc
2461 gccccaagag ccaaaaataa atgggaattg aaaaaaaaaa aaaaaaaaaa aaaa
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