LOCUS BC007592 2039 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens SAP30 binding protein, mRNA (cDNA clone MGC:15645
IMAGE:3346233), complete cds.
ACCESSION BC007592
VERSION BC007592.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2039)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2039)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: l Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 47834346.
FEATURES Location/Qualifiers
source 1..2039
/db_xref="H-InvDB:HIT000033319"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15645 IMAGE:3346233"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_20"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..2039
/gene="SAP30BP"
/gene_synonym="HCNGP"
/gene_synonym="HTRG"
/gene_synonym="HTRP"
/db_xref="GeneID:29115"
/db_xref="HGNC:HGNC:30785"
/db_xref="IMGT/GENE-DB:30785"
/db_xref="MIM:30785"
CDS 12..938
/gene="SAP30BP"
/gene_synonym="HCNGP"
/gene_synonym="HTRG"
/gene_synonym="HTRP"
/codon_start=1
/product="SAP30BP protein"
/protein_id="AAH07592.1"
/db_xref="GeneID:29115"
/db_xref="HGNC:HGNC:30785"
/db_xref="IMGT/GENE-DB:30785"
/db_xref="MIM:30785"
/translation="MAGKKNVLSSLAVYAEDSEPESDGEAGIEAVGSAAEEKGGLVSD
AYGEDDFSRLGGDEDGYEEEEDENSRQSEDDDSETEKPEADDPKDNTEAEKRDPQELV
ASFSERVRNMSPDEIKIPPEPPGRCSNHLQDKIQKLYERKIKEGMDMNYIIQRKKEFR
NPSIYEKLIQFCAIDELGTNYPKDMFDPHGWSEDSYYEALAKAQKIEMDKLEKAKKER
TKIEFVTGTKKGTTTNATSTTTTTASTAVADAQKRKSKWDSAIPVTTIAQPTILTTTA
TLPAVVTVTTSASGSKTTVISAVGTIVKKAKQ"
BASE COUNT 531 a 526 c 570 g 412 t
ORIGIN
1 gtgggaataa gatggcgggg aagaagaatg ttctgtcgtc tctcgcagtt tacgcggaag
61 attcagagcc cgagtctgat ggcgaggctg gaatcgaggc ggtgggcagc gcggctgagg
121 agaaaggcgg attggtatct gatgcctatg gggaggatga cttttctcgt ctagggggtg
181 atgaagatgg ttatgaagaa gaagaagatg agaacagtag acagtcggaa gatgacgatt
241 cagagactga aaaacctgag gctgatgacc caaaggataa tacagaagca gaaaagcgag
301 acccccagga actcgtggcc tccttttctg aaagagttcg gaacatgtcg cctgatgaaa
361 tcaagatccc gccagaaccc cctggcagat gttcaaatca cttgcaagac aagatccaga
421 agctttatga acgaaagata aaggagggaa tggatatgaa ctacattatc caaaggaaga
481 aagaatttcg gaaccctagc atctacgaga agctgatcca gttctgtgcc attgacgagc
541 ttggcaccaa ctacccaaag gatatgtttg atccccatgg ctggtctgag gactcctact
601 atgaggcatt agccaaggcc cagaaaattg agatggacaa attggaaaag gccaaaaagg
661 agcgaacaaa aattgagttt gtgacgggca ccaaaaaagg caccacgacc aacgccacgt
721 ccaccaccac taccactgcc agcacagctg ttgcagatgc tcagaagaga aagagcaagt
781 gggattcggc tatcccagtg acaacgatag cccagcccac catcctcacc accacagcca
841 ccctgccagc tgttgtcacg gtcaccacca gcgccagcgg ctccaagacc accgtcatct
901 ctgctgtggg caccattgtg aagaaggcca agcagtgacc tgaggggcca ccctaggact
961 tgaaaggacc gtgcagccca gtgaccactg cccagtggga ggcgccactt tgtatatttc
1021 aggactggga cctactcccc agatgccacc tgagaggagc ttctgtttgg cattccagat
1081 ggaaggacag gcagcacggg agccaggcgc tgtggacagg gtctgtccac gcaccacctg
1141 gggtctgccg cctattaaaa gtgccgtatt cttacctctt ggcatctcag atgcactggc
1201 ctctcctgca ttctgtttgc aggcaaatgc ttcagctcac atgtccccca agactcaata
1261 gtcttggttg ggactattgc ctcagggttg acaacagggt gatggaggcc tgggacgctg
1321 ttcagagggg tgacccaaga agtcaccgtt gttatccgtg tatgcctctg ggcatggaca
1381 ggcgggagtc cccgagcccc acgtatgccc catctgccgc cttgatccca aaacccagcc
1441 agttctcggg tgatggtgga gctgtgctcc cttgagtgca cttgagcact ccccagacca
1501 gatcactttt tggacacacc caggaaggct tttgaagtca agccagtcct ttggtgcccg
1561 gtgagcgcag ccagcaggag ctgagcagcg ggggagatga atcacctcct gccttggcga
1621 ggcggcagct cattgtttac aggcaagccc tgctcctggg agggctcctg ccaccccacc
1681 cttcctctgt gtgttatctc tgccccacag cagcccctgg gcagcaccag tggccactgg
1741 gctccccccg gggttgaaac gggtttccca gaccaggggt tcagaggaga ctatttaccc
1801 ttcatgatct ttggcgattc tccactggag cggaagggct gtgtgtcaaa agaaggaagc
1861 caggctgtga agggccgtgt tgctttcagt gggtgggcag aggtttagaa aggtggttct
1921 gaaatggcac ctggtactct tgtgggacct ggggaatata aggaactctg tgcatgaggt
1981 ttcaaaaata aaaattgagt ccactctccc cgtacacaca caaaaaaaaa aaaaaaaaa
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