LOCUS BC007570 3116 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens Fas (TNFRSF6) binding factor 1, mRNA (cDNA clone
IMAGE:3029289), partial cds.
ACCESSION BC007570
VERSION BC007570.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3116)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3116)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: f Column: 10.
FEATURES Location/Qualifiers
source 1..3116
/db_xref="H-InvDB:HIT000086846"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3029289"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..3116
/gene="FBF1"
/gene_synonym="FBF-1"
/gene_synonym="FLJ00103"
/db_xref="GeneID:85302"
CDS <1..1950
/gene="FBF1"
/gene_synonym="FBF-1"
/gene_synonym="FLJ00103"
/codon_start=1
/product="FBF1 protein"
/protein_id="AAH07570.1"
/db_xref="GeneID:85302"
/translation="ERPCVRPGVSGSPVTQNHAASALPTGSPKRGTAPGDLSATEPAT
CFPSTQKPTEPSVPVQPLLPESLARSLLPSTEYQKQLLAAQVQLQCSPAELQAELLHS
QARLAELEAQVRKLELERAQHELLLGSLQQQHQADLELIESAHRSRIKVLETSYQQRE
ERLRRENEELSARYLSQCQEAEQARAELTAQHQRRLAAIAQEKDQEMERLRELQRASI
LDMRRDHEEQLQRLKLLKDREVDAATSATSHTRSLNSIIHQMEKFSSSLHELSSRVEA
SHLTTSQERELGIRQRDEQLRALQERLGQQQRDMEEERSRQQEVIGKMEARLNEQSRL
LEQERWRVTAEQSKAESMQRALEEQRKVTAQQMAMERAELERAKSALLEEQKSVMLKC
GEERRRLAAEWAEFSAQQKLSKERAEREAERALQVDTQREGTLISLAKQAELKIRASE
LRAEEKQLAAERAALEQERQELRLEKERINATALRVKLRAEEVESMSKVASEKYEEGE
RALREAQQVQAEQQARLQAVQQQQERLRKQEQHMHQEHLSLAQQRLQLDRARQDLPSS
LVGLFPRAQGPAASSQSALMPPAPTTRWCSQPPTGLDPSPLHLHARLALLRHMAEQDR
DFLENEQFFLETLKKGSYNLTSHSA"
misc_feature 850..1158
/gene="FBF1"
/gene_synonym="FBF-1"
/gene_synonym="FLJ00103"
/note="ERM; Region: Ezrin/radixin/moesin family. This
family of proteins contain a band 4.1 domain (pfam00373),
at their amino terminus. This family represents the rest
of these proteins"
/db_xref="CDD:pfam00769"
BASE COUNT 668 a 942 c 999 g 507 t
ORIGIN
1 gaaagaccgt gtgtcaggcc tggtgtctcg gggtcccctg tgactcagaa ccatgccgcc
61 tcagcactcc ctacaggttc cccaaagagg ggaacagccc ctggagacct ctcagccact
121 gagcctgcca cgtgtttccc gagcacccag aaacccacag agccttccgt gcccgtccag
181 cccctgctcc cagagtccct ggcccggagc ctgctgccga gcacagaata ccagaagcag
241 ctcctggcag cacaggtgca acttcagtgc agccccgctg agctccaggc cgagctgctg
301 catagccagg cccggctggc agagctggag gcccaggtgc ggaagctgga gctagaacgg
361 gcccagcatg agctgctgct ggggagtctg cagcagcagc accaggcaga cctggagctc
421 atcgagagtg cacacagaag ccgcatcaag gtgctagaaa catcgtacca gcaacgggag
481 gagcggctcc ggagagagaa cgaagagctg tcagctcggt atctgtcgca gtgccaggag
541 gccgaacagg cccgtgctga gcttacggcc cagcaccagc ggcgcttggc ggccatagcg
601 caggagaagg accaggaaat ggagcggctc cgggagctgc agcgggcgtc catcctagac
661 atgcgcagag accacgagga gcagctgcag cggctaaagc tgctgaagga ccgagaggtc
721 gatgcggcca ccagtgccac ctcccacacg cggtccctga atagcatcat ccaccagatg
781 gagaagttct ccagcagcct gcacgagttg tcctcccgcg tggaggcctc gcacctcacc
841 acctcccagg agcgggagct ggggatccgg cagcgtgacg agcagctgcg ggcactgcag
901 gagcggctgg gccagcagca gcgggacatg gaggaggagc ggagccggca acaggaggtc
961 atcgggaaga tggaggcacg gctgaatgag cagagccggc tgctggagca ggaacgctgg
1021 cgggtgactg ccgagcagtc caaggcggag tccatgcagc gcgccctaga ggagcaaagg
1081 aaggtcacgg cccagcagat ggccatggaa agggcggagc tggaacgggc caagagcgcc
1141 ttgctggagg agcagaagtc tgtcatgctc aagtgcgggg aggagcggcg gcgcctggct
1201 gccgagtggg cggagttctc cgcgcagcaa aagctgagta aggagcgggc cgagcgcgag
1261 gccgagcggg cattgcaggt ggacacccag cgggagggca ccctcatcag cctggccaag
1321 caggctgagc tgaagatcag ggccagcgag ctccgggccg aggagaagca gctggcagcg
1381 gagagagcag ccctggagca ggagcggcag gagctgcggc tggagaagga gaggatcaac
1441 gccaccgccc tgcgtgtcaa gctccgcgcc gaggaggtgg agagcatgag caaggtggcc
1501 tccgagaagt acgaggaggg ggagcgggca ttgcgcgagg cccagcaggt gcaggcagag
1561 cagcaggccc ggttgcaggc ggtgcagcaa cagcaggagc ggctgcggaa gcaggagcag
1621 cacatgcacc aggagcatct gagtctggcc cagcagaggc tgcaactgga ccgcgcacga
1681 caggacctgc cctctagcct cgtgggtctg ttccccaggg cccagggccc tgcagcctcc
1741 agccagagtg ccctcatgcc tcctgctccc accacccgtt ggtgcagcca gccgccaact
1801 ggcctggacc ccagcccctt gcacctccat gccaggctgg cactgctgag gcacatggca
1861 gagcaggacc gtgacttctt ggagaatgaa cagttcttcc tggagaccct gaagaaaggg
1921 tcctacaatt tgacatctca ttcagcctga gtgggacccc agccgattcc ccaacagagg
1981 gttcggaccc cagaactgtc ctgttcctcc ggctgcctcc atggaggcag tgcctgggga
2041 ggattctgag atgcttgagg cctgatgaca gctcttccgt ggacagggtg caagtgcatc
2101 ctttccaaat gtgccagccc ggggcagccc ctgcctctgg ggctctgtgg tgtaggctat
2161 cttaccatgg ctttggctgc cctgccccaa agccattggc ttggatctga gggtctgagt
2221 tggcagcaag gacccccagc tctcactggg ctctgtgggc tccccctggg ctctgtgggc
2281 tccccctgct ccacaggtag actgttgtgg gctctttttg cctgggcctc ttctgaggca
2341 ggagctttct tgagggatgc cacaaacagc cttccctact ccctgccaga gcagttccct
2401 ccctgatgag ctggagaagg gccctctggc ctcctgacag tacagggagg gcaccagcta
2461 gatcctccct tgtggtgtga gatgttcctg gaactcagcc aggccctcct cctcctgggc
2521 ttgcccagag cacccaccct attcccagca ttgcccgaag gaccaaccag tttgggtgaa
2581 cagtggcctc ctcagcttcc tccccatctg ggtgccccac cggcggcgga gggagctgtg
2641 gcgatggtgg ggtgtgggga gggacgagga gggaagcctc tgtgctgctc acctgcccaa
2701 agcccagctc agcgggtacg cagtggaggc gacaaggaac caatcacaac tacagaggtt
2761 tctctgatcc tcctccactc ccgctgcttc aacttgacta agcttaaaaa aactgctttt
2821 gccatggctc atcggagttt atacttattt cttagaaaat gtttcctgtt atttgctgga
2881 caagtcccaa agaacaggca gatgttctta ttaaaagatc agcctataag attggtcagg
2941 accaggcgcc tctggccacg tgcctctccc ctccagcacc tgcggtctgc ggtggcacct
3001 ggcagctgga ccacagccag gagaagggta ctattagccc tgcttcaaac atgcagaaac
3061 tgaggcccgg ggagattaaa taacctgcct gaaatgacaa aaaaaaaaaa aaaaaa
//