LOCUS BC007566 1996 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens mannose-6-phosphate receptor binding protein 1, mRNA
(cDNA clone MGC:15516 IMAGE:3028104), complete cds.
ACCESSION BC007566
VERSION BC007566.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1996)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1996)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (10-MAY-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 22 Row: f Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: Hexamer frequency ORF
analysis, Similarity but not identity to protein.
FEATURES Location/Qualifiers
source 1..1996
/db_xref="H-InvDB:HIT000033305"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:15516 IMAGE:3028104"
/tissue_type="Muscle, rhabdomyosarcoma"
/clone_lib="NIH_MGC_17"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1996
/gene="M6PRBP1"
/gene_synonym="MGC11117"
/gene_synonym="MGC2012"
/gene_synonym="PP17"
/gene_synonym="TIP47"
/db_xref="GeneID:10226"
/db_xref="HGNC:HGNC:16893"
/db_xref="MIM:602702"
CDS 67..1371
/gene="M6PRBP1"
/gene_synonym="MGC11117"
/gene_synonym="MGC2012"
/gene_synonym="PP17"
/gene_synonym="TIP47"
/codon_start=1
/product="mannose-6-phosphate receptor binding protein 1"
/protein_id="AAH07566.1"
/db_xref="GeneID:10226"
/db_xref="HGNC:HGNC:16893"
/db_xref="MIM:602702"
/translation="MSADGAEADGSTQVTVEEPVQQPSVVDRVASMPLISSTCDMVSA
AYASTKESYPHVKTVCDAAEKGVRTLTAAAVSGAQPILSKLEPQIASASEYAHRGLDK
LEENLPILQQPTEKVLADTKELVSSKVSGAQEMVSSAKDTVATQLSEAVDATRGAVQS
GVDKTKSVVTGGVQSVMGSRLGQMVLSGVDTVLGKSEEWADNHLPLTDAELARIATSL
DGFDVASVQQQRQEQSYFVRLGSLSERLRQHAYEHSLGKLRATKQRAQEALLQLSQAL
SLMETVKQGVDQKLVEGQEKLHQMWLSWNQKQLQGPEKEPPKPEQVESRALTMFRDIA
QQLQATCTSLGSSIQGLPTNVKDQVQQARRQVEDLQATFSSIHSFQDLSSSILAQSRE
RVASAREALDHMVEYVAQNTPVTWLVGPFAPGITEKAPEEKK"
BASE COUNT 461 a 574 c 610 g 351 t
ORIGIN
1 ctggttttga agtcgcggcc gctgttcctg ggacgtccgg ttgaccgcgc gtctgctgca
61 gagaccatgt ctgccgacgg ggcagaggct gatggcagca cccaggtgac agtggaagaa
121 ccggtacagc agcccagtgt ggtggaccgt gtggccagca tgcctctgat cagctccacc
181 tgcgacatgg tgtccgcagc ctatgcctcc accaaggaga gctacccgca cgtcaagact
241 gtctgcgacg cagcagagaa gggagtgagg accctcacgg cggctgctgt cagcggggct
301 cagccgatcc tctccaagct ggagccccag attgcatcag ccagcgaata cgcccacagg
361 gggctggaca agttggagga gaacctcccc atcctgcagc agcccacgga gaaggtcctg
421 gcggacacca aggagcttgt gtcgtctaag gtgtcggggg cccaagagat ggtgtctagc
481 gccaaggaca cggtggccac ccaattgtcg gaggcggtgg acgcgacccg cggtgctgtg
541 cagagcggcg tggacaagac aaagtccgta gtgaccggcg gcgtccaatc agtcatgggc
601 tcccgcttgg gccagatggt gctgagtggg gtcgacacgg tgctggggaa gtcggaggag
661 tgggcggaca accacctgcc ccttacggat gccgaactgg cccgcatcgc cacatccctg
721 gatggcttcg acgtcgcgtc cgtgcagcag cagcggcagg aacagagcta cttcgtacgt
781 ctgggctccc tgtcggagag gctgcggcag cacgcctatg agcactcgct gggcaagctt
841 cgagccacca agcagagggc acaggaggct ctgctgcagc tgtcgcaggc cctaagcctg
901 atggaaactg tcaagcaagg cgttgatcag aagctggtgg aaggccagga gaagctgcac
961 cagatgtggc tcagctggaa ccagaagcag ctccagggcc ccgagaagga gccgcccaag
1021 ccagagcagg tcgagtcccg ggcgctcacc atgttccggg acattgccca gcaactgcag
1081 gccacctgta cctccctggg gtccagcatt cagggcctcc ccaccaatgt gaaggaccag
1141 gtgcagcagg cccgccgcca ggtggaggac ctccaggcca cgttttccag catccactcc
1201 ttccaggacc tgtccagcag cattctggcc cagagccgtg agcgtgtcgc cagcgcccgc
1261 gaggccctgg accacatggt ggaatatgtg gcccagaaca cacctgtcac gtggctcgtg
1321 ggaccctttg cccctggaat cactgagaaa gccccggagg agaagaagta gggggagagg
1381 agaggactca gcgggccccg tctctataat gcagctgtgc tctggagtcc tcaacccggg
1441 gctcatttca aacttatttt ctagccactc ctcccagctc ttctgtgctg tccacttggg
1501 aagctaaggc tctcaaaacg ggcatcaccc agttgaccca tctctcagcc tctctgagct
1561 tggaagaagc ctgttctgag cctcacccta tcagtcagta gagagagatg tccagaaaaa
1621 aatatctttc aggaaagttc tcccctgcag aatttttttt ccttgttaaa tatcaggaat
1681 ataggccggg tgcggtggct cacacctgta atcccagcac tttgggaggc tgaggcgggc
1741 ggaacacctg aggtcaggtg ttcgagacca gccaggccaa catggtgaaa ccccgtctct
1801 actaaaaata caaaaaaaaa tgagccgggc atggtagcag gtgtctgtta tcccagttag
1861 gaggctgagg caagagaatc tcttgaacct gagaggcgga ggttgcagtg agccaagatc
1921 gcgccattgc actccagcct gggggacaag agtgagactt agtctcaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaa
//